RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W LPP1Q04396 274 aa1.99□□□□□ -2.09
SEC4YFL005W NEJ1Q06148 342 aa1.99□□□□□ -2.09
SEC4YFL005W PSF1Q12488 208 aa1.99□□□□□ -2.09
SEC4YFL005W GCN3P14741 305 aa1.98□□□□□ -2.09
SEC4YFL005W YPK2P18961 677 aa1.98□□□□□ -2.09
SEC4YFL005W OAC1P32332 324 aa1.98□□□□□ -2.09
SEC4YFL005W FCY21P40039 528 aa1.98□□□□□ -2.09
SEC4YFL005W PDR17P53844 350 aa1.98□□□□□ -2.09
SEC4YFL005W MRPS8Q03799 155 aa1.98□□□□□ -2.09
SEC4YFL005W YRA1Q12159 226 aaKnown RBP1.98□□□□□ -2.09
SEC4YFL005W REP2P03872 296 aa1.97□□□□□ -2.09
SEC4YFL005W FBA1P14540 359 aaKnown RBP1.97□□□□□ -2.09
SEC4YFL005W SCL1P21243 252 aaKnown RBP1.97□□□□□ -2.09
SEC4YFL005W ATG22P25568 528 aa1.97□□□□□ -2.09
SEC4YFL005W IDH1P28834 360 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
SEC4YFL005W PEX4P29340 183 aa1.97□□□□□ -2.09
SEC4YFL005W TAF14P35189 244 aa1.97□□□□□ -2.09
SEC4YFL005W POP4P38336 279 aa1.97□□□□□ -2.09
SEC4YFL005W IKI1P38874 309 aa1.97□□□□□ -2.09
SEC4YFL005W EGD2P38879 174 aaKnown RBP1.97□□□□□ -2.09
SEC4YFL005W MTW1P39731 289 aa1.97□□□□□ -2.09
SEC4YFL005W SEC72P39742 193 aaKnown RBP1.97□□□□□ -2.09
SEC4YFL005W CIS3P47001 227 aa1.97□□□□□ -2.09
SEC4YFL005W YJL027CP47063 138 aaPredicted RBP1.97□□□□□ -2.09
SEC4YFL005W CUS2P53830 285 aaPredicted RBP1.97□□□□□ -2.09
SEC4YFL005W MATALPHA2P0CY08 210 aa1.96□□□□□ -2.1
SEC4YFL005W HMLALPHA2P0CY09 210 aa1.96□□□□□ -2.1
SEC4YFL005W ATP7P30902 174 aa1.96□□□□□ -2.1
SEC4YFL005W TCA17P32613 152 aa1.96□□□□□ -2.1
SEC4YFL005W ERV15P38312 142 aa1.96□□□□□ -2.1
SEC4YFL005W YHR180WP38868 163 aa1.96□□□□□ -2.1
SEC4YFL005W RRP17Q04031 235 aaPredicted RBP1.96□□□□□ -2.1
SEC4YFL005W TRM12Q04235 462 aa1.96□□□□□ -2.1
SEC4YFL005W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SEC4YFL005W TDA8Q6B2U8 126 aa1.96□□□□□ -2.1
SEC4YFL005W IKI3Q06706 1349 aaKnown RBP1.95□□□□□ -2.1
SEC4YFL005W SEC4P07560 215 aaKnown RBP1.95□□□□□ -2.1
SEC4YFL005W YLR156WP0CE96 114 aa1.95□□□□□ -2.1
SEC4YFL005W YLR159WP0CE97 114 aa1.95□□□□□ -2.1
SEC4YFL005W YLR161WP0CE98 114 aa1.95□□□□□ -2.1
SEC4YFL005W MRPL28P36527 147 aa1.95□□□□□ -2.1
SEC4YFL005W PHO88P38264 188 aaPredicted RBP1.95□□□□□ -2.1
SEC4YFL005W TRM5P38793 499 aa1.95□□□□□ -2.1
SEC4YFL005W YKE4P40544 346 aa1.95□□□□□ -2.1
SEC4YFL005W PRM10P42946 383 aa1.95□□□□□ -2.1
SEC4YFL005W GET1P53192 235 aa1.95□□□□□ -2.1
SEC4YFL005W GIM5Q04493 163 aa1.95□□□□□ -2.1
SEC4YFL005W SMD2Q06217 110 aaKnown RBP1.95□□□□□ -2.1
SEC4YFL005W ABP140Q08641 628 aaKnown RBP1.95□□□□□ -2.1
SEC4YFL005W USB1Q12208 290 aaKnown RBP1.95□□□□□ -2.1
SEC4YFL005W BOL1Q3E793 110 aa1.95□□□□□ -2.1
SEC4YFL005W RAD9P14737 1309 aa1.94□□□□□ -2.1
SEC4YFL005W CBF1P17106 351 aa1.94□□□□□ -2.1
SEC4YFL005W RFA3P26755 122 aaKnown RBP1.94□□□□□ -2.1
SEC4YFL005W MEI4P29467 408 aa1.94□□□□□ -2.1
SEC4YFL005W SKG1P36169 355 aa1.94□□□□□ -2.1
SEC4YFL005W AIF1P52923 378 aa1.94□□□□□ -2.1
SEC4YFL005W ERG25P53045 309 aa1.94□□□□□ -2.1
SEC4YFL005W YNR062CP53748 327 aa1.94□□□□□ -2.1
SEC4YFL005W GAS3Q03655 524 aa1.94□□□□□ -2.1
SEC4YFL005W YHR086W-AQ3E746 53 aa1.94□□□□□ -2.1
SEC4YFL005W TUS1Q06412 1307 aa1.93□□□□□ -2.1
SEC4YFL005W RAS2P01120 322 aaKnown RBP1.93□□□□□ -2.1
SEC4YFL005W HTB1P02293 131 aaKnown RBP1.93□□□□□ -2.1
SEC4YFL005W HTB2P02294 131 aa1.93□□□□□ -2.1
SEC4YFL005W CDC7P06243 507 aa1.93□□□□□ -2.1
SEC4YFL005W YCR087C-AP37263 153 aa1.93□□□□□ -2.1
SEC4YFL005W RMD6P39975 231 aa1.93□□□□□ -2.1
SEC4YFL005W PGD1P40356 397 aa1.93□□□□□ -2.1
SEC4YFL005W ICE2P40499 491 aa1.93□□□□□ -2.1
SEC4YFL005W YGR050CP53231 118 aa1.93□□□□□ -2.1
SEC4YFL005W YET3Q07451 203 aa1.93□□□□□ -2.1
SEC4YFL005W GPM2Q12008 311 aa1.93□□□□□ -2.1
SEC4YFL005W MRPS28P21771 286 aa1.92□□□□□ -2.1
SEC4YFL005W SEC17P32602 292 aa1.92□□□□□ -2.1
SEC4YFL005W YHR022CP38763 256 aa1.92□□□□□ -2.1
SEC4YFL005W AYR1P40471 297 aa1.92□□□□□ -2.1
SEC4YFL005W BMT5P40493 336 aa1.92□□□□□ -2.1
SEC4YFL005W RPL33BP41056 107 aaKnown RBP1.92□□□□□ -2.1
SEC4YFL005W CYT2Q00873 224 aa1.92□□□□□ -2.1
SEC4YFL005W PET191Q02772 108 aa1.92□□□□□ -2.1
SEC4YFL005W SWP1Q02795 286 aa1.92□□□□□ -2.1
SEC4YFL005W FUS2Q05670 677 aa1.92□□□□□ -2.1
SEC4YFL005W QCR2P07257 368 aa1.91□□□□□ -2.1
SEC4YFL005W PET9P18239 318 aaKnown RBP1.91□□□□□ -2.1
SEC4YFL005W RME1P32338 300 aaKnown RBP1.91□□□□□ -2.1
SEC4YFL005W SPS18P32572 300 aa1.91□□□□□ -2.1
SEC4YFL005W CAF4P36130 643 aa1.91□□□□□ -2.1
SEC4YFL005W UTP30P36144 274 aaKnown RBP1.91□□□□□ -2.1
SEC4YFL005W SVP26P38869 228 aa1.91□□□□□ -2.1
SEC4YFL005W TIR3P40552 269 aa1.91□□□□□ -2.1
SEC4YFL005W LSM7P53905 115 aaKnown RBP1.91□□□□□ -2.1
SEC4YFL005W SPG3Q04398 127 aaPredicted RBP1.91□□□□□ -2.1
SEC4YFL005W MCP1Q12106 302 aa1.91□□□□□ -2.1
SEC4YFL005W TSC3Q3E790 80 aa1.91□□□□□ -2.1
SEC4YFL005W RPL25P04456 142 aaKnown RBP1.9□□□□□ -2.11
SEC4YFL005W DDI2P0CH63 225 aa1.9□□□□□ -2.11
SEC4YFL005W DDI3P0CH64 225 aa1.9□□□□□ -2.11
SEC4YFL005W MRPL17P36528 281 aa1.9□□□□□ -2.11
SEC4YFL005W SHG1P38337 142 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms