RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	MCT1	Q12283	360 aa		3	□□□□□ -1.93
HIM1	YDR317W	SPO24	Q3E752	67 aa		3	□□□□□ -1.93
HIM1	YDR317W	BLM10	P43583	2143 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	PHO80	P20052	293 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	FAR1	P21268	830 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	VPH2	P32341	215 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	MRPS5	P33759	307 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	AST1	P35183	429 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	YBR096W	P38256	230 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	CHL4	P38907	458 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	RRG9	P40156	214 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	NAS2	P40555	220 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	STB1	P42845	420 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	KEG1	P43614	200 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	MAL12	P53341	584 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
HIM1	YDR317W	SNZ1	Q03148	297 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	DIG2	Q03373	323 aa	Known RBP	2.99	□□□□□ -1.93
HIM1	YDR317W	YMR315W	Q04869	349 aa	Known RBP	2.99	□□□□□ -1.93
HIM1	YDR317W	SYC1	Q08553	188 aa	Predicted RBP	2.99	□□□□□ -1.93
HIM1	YDR317W	ATP16	Q12165	160 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	RAX2	Q12465	1220 aa		2.99	□□□□□ -1.93
HIM1	YDR317W	CDC39	P25655	2108 aa	Known RBP	2.99	□□□□□ -1.93
HIM1	YDR317W	YGL041W-A	P0C5N3	154 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	PPA2	P28239	310 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	OAC1	P32332	324 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	PDC2	P32896	925 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	SRP102	P36057	244 aa	Predicted RBP	2.98	□□□□□ -1.93
HIM1	YDR317W	YHL044W	P38727	235 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	YER084W	P40057	128 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	YRB2	P40517	327 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	YFL051C	P43552	160 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	UBC13	P52490	153 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	MNT4	P53745	580 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	EOS1	P53938	366 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	COG5	P53951	403 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	PET191	Q02772	108 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	YMD8	Q03697	442 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	ELP6	Q04868	273 aa		2.98	□□□□□ -1.93
HIM1	YDR317W	YOR097C	Q12274	175 aa	Predicted RBP	2.98	□□□□□ -1.93
HIM1	YDR317W	STE18	P18852	110 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	MIR1	P23641	311 aa	Known RBP	2.97	□□□□□ -1.93
HIM1	YDR317W	CLB6	P32943	380 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	YKL187C	P34231	750 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	CLG1	P35190	452 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	DTR1	P38125	572 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	YHR035W	P38769	630 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	LSM4	P40070	187 aa	Known RBP	2.97	□□□□□ -1.93
HIM1	YDR317W	YER121W	P40076	114 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	PRE6	P40303	254 aa	Known RBP	2.97	□□□□□ -1.93
HIM1	YDR317W	PFS2	P42841	465 aa	Known RBP	2.97	□□□□□ -1.93
HIM1	YDR317W	LOH1	P47055	219 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	VOA1	P53262	265 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	PGA1	P53896	198 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	NUP49	Q02199	472 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	RCF1	Q03713	159 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	OST6	Q03723	332 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	SMP3	Q04174	516 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	TAZ1	Q06510	381 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	YOR289W	Q12012	251 aa	Predicted RBP	2.97	□□□□□ -1.93
HIM1	YDR317W	GEP5	Q12393	293 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	FSH3	Q99369	266 aa		2.97	□□□□□ -1.93
HIM1	YDR317W	TPI1	P00942	248 aa	Known RBP	2.96	□□□□□ -1.94
HIM1	YDR317W	DSF1	P0CX08	502 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	YNR073C	P0CX09	502 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	RPS23A	P0CX29	145 aa	Known RBP	2.96	□□□□□ -1.94
HIM1	YDR317W	RPS23B	P0CX30	145 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	IDP1	P21954	428 aa	Known RBP	2.96	□□□□□ -1.94
HIM1	YDR317W	MEK1	P24719	497 aa	Predicted RBP	2.96	□□□□□ -1.94
HIM1	YDR317W	FMT1	P32785	401 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	YBR063C	P38083	404 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	TIR3	P40552	269 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	YJL016W	P47072	561 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	YPL077C	Q02831	240 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	MRX11	Q03079	207 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	GPI17	Q04080	534 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	MRX8	Q05473	314 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	FIT3	Q08907	204 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	SIA1	Q12212	622 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	PST2	Q12335	198 aa	Known RBP	2.96	□□□□□ -1.94
HIM1	YDR317W	UBA3	Q99344	299 aa		2.96	□□□□□ -1.94
HIM1	YDR317W	KIN28	P06242	306 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	VAM7	P32912	316 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	SUR1	P33300	382 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	DAD2	P36162	133 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	ECM14	P38836	430 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	SBH2	P52871	88 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	PXR1	P53335	271 aa	Predicted RBP	2.95	□□□□□ -1.94
HIM1	YDR317W	NRK1	P53915	240 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	ASI3	P53983	676 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	AIM36	Q03798	255 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	API2	Q04413	109 aa		2.95	□□□□□ -1.94
HIM1	YDR317W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
HIM1	YDR317W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
HIM1	YDR317W	COX5B	P00425	151 aa		2.94	□□□□□ -1.94
HIM1	YDR317W	DBF2	P22204	572 aa		2.94	□□□□□ -1.94
HIM1	YDR317W	DAL80	P26343	269 aa		2.94	□□□□□ -1.94
HIM1	YDR317W	ECM4	P36156	370 aa		2.94	□□□□□ -1.94
HIM1	YDR317W	FRM2	P37261	193 aa		2.94	□□□□□ -1.94
HIM1	YDR317W	SHE1	P38200	338 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms