RNA–Protein interactions for RNA: YDL011C

YDL011C, Transcript of Dubious open reading frame, yeast

Gene YDL011C, Length 324 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL011C	YDL011C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.51	□□□□□ -2.33	not detected
YDL011C	YDL011C	GAS3	Q03655	524 aa		0.51	□□□□□ -2.33
YDL011C	YDL011C	LSO2	Q3E772	92 aa	Known RBP	0.51	□□□□□ -2.33
YDL011C	YDL011C	YER188C-A	P0C0V2	99 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	MRPL25	P23369	157 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	CDC10	P25342	322 aa	Known RBP	0.5	□□□□□ -2.33
YDL011C	YDL011C	SNC2	P33328	115 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	YUH1	P35127	236 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	CUS2	P53830	285 aa	Predicted RBP	0.5	□□□□□ -2.33
YDL011C	YDL011C	DID2	P69771	204 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	SWP1	Q02795	286 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	YMR007W	Q03675	126 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	KRE28	Q04431	385 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	RRT8	Q08219	342 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	ATG31	Q12421	196 aa		0.5	□□□□□ -2.33
YDL011C	YDL011C	RRP36	Q12481	300 aa	Predicted RBP	0.5	□□□□□ -2.33
YDL011C	YDL011C	ACC1	Q00955	2233 aa	Known RBP	0.49	□□□□□ -2.33
YDL011C	YDL011C	SIR2	P06700	562 aa		0.49	□□□□□ -2.33
YDL011C	YDL011C	SOK1	P40317	901 aa		0.49	□□□□□ -2.33
YDL011C	YDL011C	YLR173W	Q06247	608 aa		0.49	□□□□□ -2.33
YDL011C	YDL011C	TIM9	O74700	87 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	BCY1	P07278	416 aa	Known RBP	0.48	□□□□□ -2.33
YDL011C	YDL011C	PBN1	P25580	416 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	NTF2	P33331	125 aa	Known RBP	0.48	□□□□□ -2.33
YDL011C	YDL011C	SKG1	P36169	355 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	LDB7	P38210	180 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	YBR209W	P38311	105 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	PRE6	P40303	254 aa	Known RBP	0.48	□□□□□ -2.33
YDL011C	YDL011C	NUP84	P52891	726 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	PRM8	P53174	237 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	FSF1	Q12029	327 aa	Known RBP	0.48	□□□□□ -2.33
YDL011C	YDL011C	TDA8	Q6B2U8	126 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	ATG40	Q99325	256 aa		0.48	□□□□□ -2.33
YDL011C	YDL011C	YHR212W-A	P0CX91	67 aa		0.47	□□□□□ -2.33
YDL011C	YDL011C	GVP36	P40531	326 aa	Known RBP	0.47	□□□□□ -2.33
YDL011C	YDL011C	AIM36	Q03798	255 aa		0.47	□□□□□ -2.33
YDL011C	YDL011C	GPM2	Q12008	311 aa		0.47	□□□□□ -2.33
YDL011C	YDL011C	YLR236C	A0A023PZG4	107 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	URA6	P15700	204 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	RPO26	P20435	155 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	OPY1	P38271	328 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	SIP3	P38717	1229 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	LIA1	P47120	325 aa	Known RBP	0.46	□□□□□ -2.34
YDL011C	YDL011C	ARO8	P53090	500 aa	Known RBP	0.46	□□□□□ -2.34
YDL011C	YDL011C	SRL4	Q03085	281 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	RCE1	Q03530	315 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	MED4	Q12343	284 aa		0.46	□□□□□ -2.34
YDL011C	YDL011C	CFT1	Q06632	1357 aa	Known RBP	0.45	□□□□□ -2.34
YDL011C	YDL011C	CDC28	P00546	298 aa	Known RBP	0.45	□□□□□ -2.34
YDL011C	YDL011C	SPT3	P06844	337 aa		0.45	□□□□□ -2.34
YDL011C	YDL011C	YBR285W	P38354	144 aa		0.45	□□□□□ -2.34
YDL011C	YDL011C	YAE1	P47118	141 aa	Predicted RBP	0.45	□□□□□ -2.34
YDL011C	YDL011C	MCP1	Q12106	302 aa		0.45	□□□□□ -2.34
YDL011C	YDL011C	INO80	P53115	1489 aa		0.45	□□□□□ -2.34
YDL011C	YDL011C	MATALPHA1	P0CY06	175 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	HMLALPHA1	P0CY07	175 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	DBF2	P22204	572 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	APS1	P35181	156 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	YDR274C	P87283	123 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	PET117	Q02771	107 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	CUE4	Q04201	117 aa	Predicted RBP	0.44	□□□□□ -2.34
YDL011C	YDL011C	CDC123	Q05791	360 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	RAD28	Q12021	506 aa		0.44	□□□□□ -2.34
YDL011C	YDL011C	SEC11	P15367	167 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	YCR016W	P25617	290 aa	Known RBP	0.43	□□□□□ -2.34
YDL011C	YDL011C	SEC17	P32602	292 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	MSN4	P33749	630 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	not detected
YDL011C	YDL011C	UTP30	P36144	274 aa	Known RBP	0.43	□□□□□ -2.34
YDL011C	YDL011C	EDC3	P39998	551 aa	Known RBP	0.43	□□□□□ -2.34
YDL011C	YDL011C	COX15	P40086	486 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	FLX1	P40464	311 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	FMC1	P40491	155 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	FAR7	P43592	221 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	BXI1	P48558	297 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	ALG13	P53178	202 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	FYV6	P53913	173 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	YHR007C-A	Q07074	71 aa		0.43	□□□□□ -2.34
YDL011C	YDL011C	VMA22	P38784	181 aa		0.42	□□□□□ -2.34
YDL011C	YDL011C	AST2	P39945	430 aa	Known RBP	0.42	□□□□□ -2.34
YDL011C	YDL011C	RMD6	P39975	231 aa		0.42	□□□□□ -2.34
YDL011C	YDL011C	YFL065C	P43539	102 aa		0.42	□□□□□ -2.34
YDL011C	YDL011C	RPC17	P47076	161 aa		0.42	□□□□□ -2.34
YDL011C	YDL011C	CWC27	Q02770	301 aa		0.42	□□□□□ -2.34
YDL011C	YDL011C	URA5	P13298	226 aa	Known RBP	0.41	□□□□□ -2.34
YDL011C	YDL011C	BET1	P22804	142 aa		0.41	□□□□□ -2.34
YDL011C	YDL011C	TCA17	P32613	152 aa		0.41	□□□□□ -2.34
YDL011C	YDL011C	SSO1	P32867	290 aa		0.41	□□□□□ -2.34
YDL011C	YDL011C	BRR6	P53062	197 aa		0.41	□□□□□ -2.34
YDL011C	YDL011C	YNL247W	P53852	767 aa	Known RBP	0.41	□□□□□ -2.34
YDL011C	YDL011C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.41	□□□□□ -2.34	not detected
YDL011C	YDL011C	YLR283W	Q05867	314 aa		0.41	□□□□□ -2.34
YDL011C	YDL011C	YHR214C-E	Q8TGK0	99 aa		0.41	□□□□□ -2.34
YDL011C	YDL011C	RHO1	P06780	209 aa	Known RBP	0.4	□□□□□ -2.35
YDL011C	YDL011C	KSS1	P14681	368 aa		0.4	□□□□□ -2.35
YDL011C	YDL011C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.4	□□□□□ -2.35	not detected
YDL011C	YDL011C	YHL042W	P38729	150 aa		0.4	□□□□□ -2.35
YDL011C	YDL011C	YPL073C	P40323	161 aa		0.4	□□□□□ -2.35
YDL011C	YDL011C	MIC26	P50087	233 aa		0.4	□□□□□ -2.35
YDL011C	YDL011C	YDR249C	Q03787	373 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms