RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A YMR030W-AQ3E760 96 aa2.05□□□□□ -2.08
VMA9YCL005W-A BI3Q9ZZW7 517 aa2.05□□□□□ -2.08
VMA9YCL005W-A FKS3Q04952 1785 aa2.05□□□□□ -2.08
VMA9YCL005W-A HIS1P00498 297 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A ILV5P06168 395 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A MSF1P08425 469 aa2.04□□□□□ -2.08
VMA9YCL005W-A RPS25BP0C0T4 108 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A RPL35AP0CX84 120 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A RPL35BP0CX85 120 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A BGL2P15703 313 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A SAM2P19358 384 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A RPB8P20436 146 aa2.04□□□□□ -2.08
VMA9YCL005W-A OLE1P21147 510 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A SEC22P22214 214 aa2.04□□□□□ -2.08
VMA9YCL005W-A PPH21P23594 369 aa2.04□□□□□ -2.08
VMA9YCL005W-A ELO2P25358 347 aa2.04□□□□□ -2.08
VMA9YCL005W-A POT1P27796 417 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
VMA9YCL005W-A PEX4P29340 183 aa2.04□□□□□ -2.08
VMA9YCL005W-A TRR1P29509 319 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A MDH3P32419 343 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
VMA9YCL005W-A YEF1P32622 495 aa2.04□□□□□ -2.08
VMA9YCL005W-A ALK2P32789 676 aaPredicted RBP2.04□□□□□ -2.08
VMA9YCL005W-A EMP24P32803 203 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A MSN4P33749 630 aa2.04□□□□□ -2.08
VMA9YCL005W-A MTR2P34232 184 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A DRE2P36152 348 aa2.04□□□□□ -2.08
VMA9YCL005W-A ASC1P38011 319 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A SHE1P38200 338 aa2.04□□□□□ -2.08
VMA9YCL005W-A QDR3P38227 689 aa2.04□□□□□ -2.08
VMA9YCL005W-A ZTA1P38230 334 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A YPC1P38298 316 aa2.04□□□□□ -2.08
VMA9YCL005W-A URA8P38627 578 aaPredicted RBP2.04□□□□□ -2.08
VMA9YCL005W-A HTD2P38790 280 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A YHR127WP38833 243 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A MET30P39014 640 aa2.04□□□□□ -2.08
VMA9YCL005W-A SNU13P39990 126 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A SMB1P40018 196 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A NSA2P40078 261 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A FIS1P40515 155 aa2.04□□□□□ -2.08
VMA9YCL005W-A TES1P41903 349 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A SSU1P41930 458 aa2.04□□□□□ -2.08
VMA9YCL005W-A OTU1P43558 301 aa2.04□□□□□ -2.08
VMA9YCL005W-A PAU5P43575 122 aa2.04□□□□□ -2.08
VMA9YCL005W-A XPT1P47165 209 aa2.04□□□□□ -2.08
VMA9YCL005W-A TTI2P47168 421 aa2.04□□□□□ -2.08
VMA9YCL005W-A OST3P48439 350 aa2.04□□□□□ -2.08
VMA9YCL005W-A SHY1P53266 389 aa2.04□□□□□ -2.08
VMA9YCL005W-A YNL234WP53857 426 aa2.04□□□□□ -2.08
VMA9YCL005W-A YNL140CP53910 189 aa2.04□□□□□ -2.08
VMA9YCL005W-A NUP100Q02629 959 aa2.04□□□□□ -2.08
VMA9YCL005W-A YDR248CQ03786 193 aa2.04□□□□□ -2.08
VMA9YCL005W-A MRPL1Q04599 285 aa2.04□□□□□ -2.08
VMA9YCL005W-A SEN15Q04675 128 aa2.04□□□□□ -2.08
VMA9YCL005W-A ERP1Q05359 219 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A RNH202Q05635 350 aa2.04□□□□□ -2.08
VMA9YCL005W-A LOA1Q06508 300 aa2.04□□□□□ -2.08
VMA9YCL005W-A RRG1Q12167 365 aaPredicted RBP2.04□□□□□ -2.08
VMA9YCL005W-A UBX3Q12229 455 aa2.04□□□□□ -2.08
VMA9YCL005W-A AIM45Q12480 344 aaKnown RBP2.04□□□□□ -2.08
VMA9YCL005W-A YIR021W-AQ3E739 70 aa2.04□□□□□ -2.08
VMA9YCL005W-A RPS25AQ3E792 108 aaPredicted RBP2.04□□□□□ -2.08
VMA9YCL005W-A IZH4Q99393 312 aa2.04□□□□□ -2.08
VMA9YCL005W-A TDH2P00358 332 aaKnown RBP2.03□□□□□ -2.08
VMA9YCL005W-A COX2P00410 251 aa2.03□□□□□ -2.08
VMA9YCL005W-A PHO2P07269 559 aa2.03□□□□□ -2.08
VMA9YCL005W-A RIP1P08067 215 aa2.03□□□□□ -2.08
VMA9YCL005W-A PUT1P09368 476 aa2.03□□□□□ -2.08
VMA9YCL005W-A URA5P13298 226 aaKnown RBP2.03□□□□□ -2.08
VMA9YCL005W-A YCR023CP25351 611 aa2.03□□□□□ -2.08
VMA9YCL005W-A PEX34P25584 144 aa2.03□□□□□ -2.08
VMA9YCL005W-A ERG3P32353 365 aa2.03□□□□□ -2.08
VMA9YCL005W-A TIR2P33890 251 aa2.03□□□□□ -2.08
VMA9YCL005W-A CMC1P36064 111 aa2.03□□□□□ -2.08
VMA9YCL005W-A PAN3P36102 679 aaPredicted RBP2.03□□□□□ -2.08
VMA9YCL005W-A PAU24P38155 120 aa2.03□□□□□ -2.08
VMA9YCL005W-A YBR013CP38215 129 aa2.03□□□□□ -2.08
VMA9YCL005W-A YBR096WP38256 230 aa2.03□□□□□ -2.08
VMA9YCL005W-A DOG2P38773 246 aa2.03□□□□□ -2.08
VMA9YCL005W-A SPL2P38839 148 aa2.03□□□□□ -2.08
VMA9YCL005W-A YEA6P39953 335 aa2.03□□□□□ -2.08
VMA9YCL005W-A YND1P40009 630 aa2.03□□□□□ -2.08
VMA9YCL005W-A HMF1P40037 129 aaKnown RBP2.03□□□□□ -2.08
VMA9YCL005W-A YER085CP40058 173 aa2.03□□□□□ -2.08
VMA9YCL005W-A FAU1P40099 211 aa2.03□□□□□ -2.08
VMA9YCL005W-A YIL169CP40442 995 aa2.03□□□□□ -2.08
VMA9YCL005W-A YIL089WP40500 205 aa2.03□□□□□ -2.08
VMA9YCL005W-A MSL1P40567 111 aaPredicted RBP2.03□□□□□ -2.08
VMA9YCL005W-A CAT5P41735 233 aa2.03□□□□□ -2.08
VMA9YCL005W-A YFL012WP43580 148 aa2.03□□□□□ -2.08
VMA9YCL005W-A YJR111CP47148 283 aaKnown RBP2.03□□□□□ -2.08
VMA9YCL005W-A YGR066CP53242 292 aa2.03□□□□□ -2.08
VMA9YCL005W-A PAU12P53343 120 aa2.03□□□□□ -2.08
VMA9YCL005W-A YPL014WQ02606 381 aa2.03□□□□□ -2.08
VMA9YCL005W-A STD1Q02794 444 aa2.03□□□□□ -2.08
VMA9YCL005W-A ADD37Q03233 198 aa2.03□□□□□ -2.08
VMA9YCL005W-A YDR391CQ04170 232 aa2.03□□□□□ -2.08
VMA9YCL005W-A SEC13Q04491 297 aaKnown RBP2.03□□□□□ -2.08
VMA9YCL005W-A YPR098CQ06089 161 aa2.03□□□□□ -2.08
VMA9YCL005W-A DIC1Q06143 298 aa2.03□□□□□ -2.08
VMA9YCL005W-A YLR030WQ07967 263 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms