RNA–Protein interactions for RNA: YBR266C

SLM6, Transcript of Protein with a potential role in actin cytoskeleton organization, yeast

Gene SLM6, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLM6	YBR266C	TUS1	Q06412	1307 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	MET5	P47169	1442 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	YMR31	P19955	123 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	YET1	P35723	206 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	MRPL28	P36527	147 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	YER085C	P40058	173 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	COX15	P40086	486 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	PRE6	P40303	254 aa	Known RBP	0.91	□□□□□ -2.26
SLM6	YBR266C	EAF6	P47128	113 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	SWP1	Q02795	286 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	YML108W	Q03759	105 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	YDR248C	Q03786	193 aa		0.91	□□□□□ -2.26
SLM6	YBR266C	THP2	O13539	261 aa	Known RBP	0.9	□□□□□ -2.27
SLM6	YBR266C	TIM9	O74700	87 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	VMA6	P32366	345 aa	Known RBP	0.9	□□□□□ -2.27
SLM6	YBR266C	UTP30	P36144	274 aa	Known RBP	0.9	□□□□□ -2.27
SLM6	YBR266C	UMP1	P38293	148 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	BXI1	P48558	297 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	MIC26	P50087	233 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	BRR6	P53062	197 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	PRM8	P53174	237 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	ANT1	Q06497	328 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	MCP1	Q12106	302 aa		0.9	□□□□□ -2.27
SLM6	YBR266C	RPL28	P02406	149 aa	Known RBP	0.89	□□□□□ -2.27
SLM6	YBR266C	SEC17	P32602	292 aa		0.89	□□□□□ -2.27
SLM6	YBR266C	TMA19	P35691	167 aa	Known RBP	0.89	□□□□□ -2.27
SLM6	YBR266C	FAR7	P43592	221 aa		0.89	□□□□□ -2.27
SLM6	YBR266C	SAY1	P53324	424 aa		0.89	□□□□□ -2.27
SLM6	YBR266C	RIO1	Q12196	484 aa	Known RBP	0.89	□□□□□ -2.27
SLM6	YBR266C	CPA1	P07258	411 aa	Known RBP	0.88	□□□□□ -2.27
SLM6	YBR266C	RPL24B	P24000	155 aa	Known RBP	0.88	□□□□□ -2.27
SLM6	YBR266C	TCA17	P32613	152 aa		0.88	□□□□□ -2.27
SLM6	YBR266C	SSO1	P32867	290 aa		0.88	□□□□□ -2.27
SLM6	YBR266C	APS1	P35181	156 aa		0.88	□□□□□ -2.27
SLM6	YBR266C	TCD1	P38756	429 aa		0.88	□□□□□ -2.27
SLM6	YBR266C	RTC3	P38804	111 aa	Predicted RBP	0.88	□□□□□ -2.27
SLM6	YBR266C	GVP36	P40531	326 aa	Known RBP	0.88	□□□□□ -2.27
SLM6	YBR266C	ERJ5	P43613	295 aa	Predicted RBP	0.88	□□□□□ -2.27
SLM6	YBR266C	NUP57	P48837	541 aa		0.88	□□□□□ -2.27
SLM6	YBR266C	TSC3	Q3E790	80 aa		0.88	□□□□□ -2.27
SLM6	YBR266C	YHR214C-E	Q8TGK0	99 aa		0.88	□□□□□ -2.27
SLM6	YBR266C	UBR2	Q07963	1872 aa		0.87	□□□□□ -2.27
SLM6	YBR266C	PPA2	P28239	310 aa		0.87	□□□□□ -2.27
SLM6	YBR266C	SNC2	P33328	115 aa		0.87	□□□□□ -2.27
SLM6	YBR266C	SKG1	P36169	355 aa		0.87	□□□□□ -2.27
SLM6	YBR266C	RTR1	P40084	226 aa	Predicted RBP	0.87	□□□□□ -2.27
SLM6	YBR266C	MPA43	P53583	542 aa	Predicted RBP	0.87	□□□□□ -2.27
SLM6	YBR266C	FSF1	Q12029	327 aa	Known RBP	0.87	□□□□□ -2.27
SLM6	YBR266C	YPL162C	Q12042	273 aa		0.87	□□□□□ -2.27
SLM6	YBR266C	YKL183C-A	Q3E765	70 aa		0.87	□□□□□ -2.27
SLM6	YBR266C	SIR2	P06700	562 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
SLM6	YBR266C	ERG28	P40030	148 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	YER076C	P40049	302 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	KNH1	P50112	268 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	POP3	P53833	195 aa	Predicted RBP	0.86	□□□□□ -2.27
SLM6	YBR266C	PET191	Q02772	108 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	GPM2	Q12008	311 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	YFR032C-B	Q8TGU2	87 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	SEY1	Q99287	776 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	MSB2	P32334	1306 aa		0.86	□□□□□ -2.27
SLM6	YBR266C	PTM1	P32857	523 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	BMH2	P34730	273 aa	Known RBP	0.85	□□□□□ -2.27
SLM6	YBR266C	CBT1	P36038	271 aa	Predicted RBP	0.85	□□□□□ -2.27
SLM6	YBR266C	SIP3	P38717	1229 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	AST2	P39945	430 aa	Known RBP	0.85	□□□□□ -2.27
SLM6	YBR266C	RMD6	P39975	231 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	YNL194C	P40169	301 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	ADO1	P47143	340 aa	Known RBP	0.85	□□□□□ -2.27
SLM6	YBR266C	MGA1	P53050	456 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	YGR050C	P53231	118 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	YDR274C	P87283	123 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	UBC7	Q02159	165 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	ATG40	Q99325	256 aa		0.85	□□□□□ -2.27
SLM6	YBR266C	YDR157W	A0A023PZE8	133 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	YLR236C	A0A023PZG4	107 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	YBR121C-A	P0C5L4	52 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	NHP6B	P11633	99 aa	Known RBP	0.84	□□□□□ -2.27
SLM6	YBR266C	GCN3	P14741	305 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	TFC1	P32367	649 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	TVP38	P36164	337 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	YBR209W	P38311	105 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	OTU1	P43558	301 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	YDR249C	Q03787	373 aa		0.84	□□□□□ -2.27
SLM6	YBR266C	VAR1	P02381	398 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	SEC4	P07560	215 aa	Known RBP	0.83	□□□□□ -2.28
SLM6	YBR266C	KSS1	P14681	368 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	BET1	P22804	142 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	PBN1	P25580	416 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	PRX1	P34227	261 aa	Known RBP	0.83	□□□□□ -2.28
SLM6	YBR266C	VMA22	P38784	181 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	PDR17	P53844	350 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	YDL180W	Q12301	547 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	JLP1	Q12358	412 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	YNL146C-A	Q3E7Z1	64 aa		0.83	□□□□□ -2.28
SLM6	YBR266C	URA5	P13298	226 aa	Known RBP	0.82	□□□□□ -2.28
SLM6	YBR266C	ATP15	P21306	62 aa		0.82	□□□□□ -2.28
SLM6	YBR266C	SPS18	P32572	300 aa		0.82	□□□□□ -2.28
SLM6	YBR266C	MGM101	P32787	269 aa	Known RBP	0.82	□□□□□ -2.28
SLM6	YBR266C	YBR285W	P38354	144 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms