RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C EDS1P38073 919 aa5.98□□□□□ -1.45
TDP1YBR223C SLM6P38343 150 aa5.98□□□□□ -1.45
TDP1YBR223C PAC2P39937 518 aa5.98□□□□□ -1.45
TDP1YBR223C SLM1P40485 686 aa5.98□□□□□ -1.45
TDP1YBR223C RFU1Q08003 200 aa5.98□□□□□ -1.45
TDP1YBR223C AIM45Q12480 344 aaKnown RBP5.98□□□□□ -1.45
TDP1YBR223C RPB7P34087 171 aa5.97□□□□□ -1.45
TDP1YBR223C ECO1P43605 281 aa5.97□□□□□ -1.45
TDP1YBR223C DUG1P43616 481 aaKnown RBP5.97□□□□□ -1.45
TDP1YBR223C PEF1P53238 335 aa5.97□□□□□ -1.45
TDP1YBR223C TNA1P53322 534 aa5.97□□□□□ -1.45
TDP1YBR223C MSO1P53604 210 aaKnown RBP5.97□□□□□ -1.45
TDP1YBR223C YMR279CQ03263 540 aa5.97□□□□□ -1.45
TDP1YBR223C YMR082CQ04276 118 aa5.97□□□□□ -1.45
TDP1YBR223C MDM30Q05930 598 aa5.97□□□□□ -1.45
TDP1YBR223C YOL029CQ08187 201 aa5.97□□□□□ -1.45
TDP1YBR223C YPR108W-AQ3E7B3 70 aa5.97□□□□□ -1.45
TDP1YBR223C YPR117WQ06116 2489 aa5.97□□□□□ -1.45
TDP1YBR223C MET3P08536 511 aa5.96□□□□□ -1.45
TDP1YBR223C RPB3P16370 318 aaKnown RBP5.96□□□□□ -1.45
TDP1YBR223C DAL82P21705 255 aa5.96□□□□□ -1.45
TDP1YBR223C DEG1P31115 442 aaKnown RBP5.96□□□□□ -1.45
TDP1YBR223C TOK1P40310 691 aa5.96□□□□□ -1.45
TDP1YBR223C HNT2P49775 206 aa5.96□□□□□ -1.45
TDP1YBR223C ERG25P53045 309 aa5.96□□□□□ -1.45
TDP1YBR223C TEX1P53851 422 aaKnown RBP5.96□□□□□ -1.45
TDP1YBR223C HOF1Q05080 669 aa5.96□□□□□ -1.45
TDP1YBR223C ASM4Q05166 528 aa5.96□□□□□ -1.45
TDP1YBR223C IZH2Q12442 317 aa5.96□□□□□ -1.45
TDP1YBR223C COA2Q3E823 68 aa5.96□□□□□ -1.45
TDP1YBR223C FLO9P39712 1322 aa5.96□□□□□ -1.46
TDP1YBR223C NUD1P32336 851 aa5.96□□□□□ -1.46
TDP1YBR223C MCH2P36032 473 aa5.96□□□□□ -1.46
TDP1YBR223C YER079WP40052 210 aaKnown RBP5.96□□□□□ -1.46
TDP1YBR223C CCS1P40202 249 aaKnown RBP5.96□□□□□ -1.46
TDP1YBR223C BLM10P43583 2143 aa5.96□□□□□ -1.46
TDP1YBR223C DAN1P47178 298 aa5.96□□□□□ -1.46
TDP1YBR223C COQ11Q05892 277 aa5.96□□□□□ -1.46
TDP1YBR223C TDA6Q06466 467 aa5.96□□□□□ -1.46
TDP1YBR223C ALG6Q12001 544 aaKnown RBP5.96□□□□□ -1.46
TDP1YBR223C HUG1Q6Q5K6 68 aa5.96□□□□□ -1.46
TDP1YBR223C GLT1Q12680 2145 aaKnown RBP5.95□□□□□ -1.46
TDP1YBR223C CDC7P06243 507 aa5.95□□□□□ -1.46
TDP1YBR223C SAG1P20840 650 aa5.95□□□□□ -1.46
TDP1YBR223C LAC1P28496 418 aa5.95□□□□□ -1.46
TDP1YBR223C SDH4P37298 181 aa5.95□□□□□ -1.46
TDP1YBR223C SWD3P38123 315 aa5.95□□□□□ -1.46
TDP1YBR223C PRS2P38620 318 aaKnown RBP5.95□□□□□ -1.46
TDP1YBR223C FLO5P38894 1075 aa5.95□□□□□ -1.46
TDP1YBR223C PEX7P39108 375 aa5.95□□□□□ -1.46
TDP1YBR223C RMD6P39975 231 aa5.95□□□□□ -1.46
TDP1YBR223C PHB1P40961 287 aa5.95□□□□□ -1.46
TDP1YBR223C YGL262WP53054 175 aa5.95□□□□□ -1.46
TDP1YBR223C ELA1P53861 379 aaPredicted RBP5.95□□□□□ -1.46
TDP1YBR223C DFG5Q05031 458 aa5.95□□□□□ -1.46
TDP1YBR223C YDL242WQ07746 117 aa5.95□□□□□ -1.46
TDP1YBR223C PAM18Q07914 168 aa5.95□□□□□ -1.46
TDP1YBR223C FCY22Q12119 530 aa5.95□□□□□ -1.46
TDP1YBR223C FRE8Q12209 686 aa5.95□□□□□ -1.46
TDP1YBR223C POF1P25576 258 aa5.94□□□□□ -1.46
TDP1YBR223C ERV1P27882 189 aa5.94□□□□□ -1.46
TDP1YBR223C CLB6P32943 380 aa5.94□□□□□ -1.46
TDP1YBR223C NTF2P33331 125 aaKnown RBP5.94□□□□□ -1.46
TDP1YBR223C YIL169CP40442 995 aa5.94□□□□□ -1.46
TDP1YBR223C YIL029CP40538 142 aa5.94□□□□□ -1.46
TDP1YBR223C PRY1P47032 299 aa5.94□□□□□ -1.46
TDP1YBR223C YAP6Q03935 383 aa5.94□□□□□ -1.46
TDP1YBR223C YMR254CQ04838 102 aa5.94□□□□□ -1.46
TDP1YBR223C FSH2Q05015 223 aa5.94□□□□□ -1.46
TDP1YBR223C YDL180WQ12301 547 aa5.94□□□□□ -1.46
TDP1YBR223C DGK1Q12382 290 aa5.94□□□□□ -1.46
TDP1YBR223C ATG40Q99325 256 aa5.94□□□□□ -1.46
TDP1YBR223C MSI1P13712 422 aa5.93□□□□□ -1.46
TDP1YBR223C FRS1P15624 595 aaKnown RBP5.93□□□□□ -1.46
TDP1YBR223C ELO2P25358 347 aa5.93□□□□□ -1.46
TDP1YBR223C YUH1P35127 236 aa5.93□□□□□ -1.46
TDP1YBR223C UPS2P35200 230 aa5.93□□□□□ -1.46
TDP1YBR223C RPL14AP36105 138 aaKnown RBP5.93□□□□□ -1.46
TDP1YBR223C CDS1P38221 457 aa5.93□□□□□ -1.46
TDP1YBR223C RPL14BP38754 138 aaKnown RBP5.93□□□□□ -1.46
TDP1YBR223C PAU15P40585 124 aa5.93□□□□□ -1.46
TDP1YBR223C LSM8P47093 109 aaKnown RBP5.93□□□□□ -1.46
TDP1YBR223C MRPL19P53875 158 aa5.93□□□□□ -1.46
TDP1YBR223C HED1Q03937 162 aa5.93□□□□□ -1.46
TDP1YBR223C DPB4Q04603 196 aaKnown RBP5.93□□□□□ -1.46
TDP1YBR223C PIN3Q06449 215 aa5.93□□□□□ -1.46
TDP1YBR223C YFH1Q07540 174 aa5.93□□□□□ -1.46
TDP1YBR223C RAD28Q12021 506 aa5.93□□□□□ -1.46
TDP1YBR223C SME1Q12330 94 aaPredicted RBP5.93□□□□□ -1.46
TDP1YBR223C LSO2Q3E772 92 aaKnown RBP5.93□□□□□ -1.46
TDP1YBR223C CMC2Q3E7A4 109 aa5.93□□□□□ -1.46
TDP1YBR223C CBP6P07253 162 aaPredicted RBP5.92□□□□□ -1.46
TDP1YBR223C SEC59P20048 519 aa5.92□□□□□ -1.46
TDP1YBR223C MAK32P23060 363 aa5.92□□□□□ -1.46
TDP1YBR223C POP5P28005 173 aa5.92□□□□□ -1.46
TDP1YBR223C NTC20P38302 140 aaPredicted RBP5.92□□□□□ -1.46
TDP1YBR223C TIF11P38912 153 aaKnown RBP5.92□□□□□ -1.46
TDP1YBR223C SEN34P39707 275 aa5.92□□□□□ -1.46
TDP1YBR223C YER158CP40095 573 aa5.92□□□□□ -1.46
TDP1YBR223C SMD3P43321 101 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms