RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	SUE1	Q06524	206 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	PSF1	Q12488	208 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	REP2	P03872	296 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	CDC7	P06243	507 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	ATG22	P25568	528 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	PTM1	P32857	523 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	UTP30	P36144	274 aa	Known RBP	1.46	□□□□□ -2.18
NCL1	YBL024W	MRPL49	P40858	161 aa	Predicted RBP	1.46	□□□□□ -2.18
NCL1	YBL024W	SNX4	P47057	423 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	COS6	P53344	381 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	LSM7	P53905	115 aa	Known RBP	1.46	□□□□□ -2.18
NCL1	YBL024W	YOL160W	Q08321	113 aa		1.46	□□□□□ -2.18
NCL1	YBL024W	YLR156W	P0CE96	114 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	YLR159W	P0CE97	114 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	YLR161W	P0CE98	114 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	SEC17	P32602	292 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	POP4	P38336	279 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	TRM5	P38793	499 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	RSM25	P40496	264 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	GGA1	Q06336	557 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	ARR2	Q06597	130 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	GRE1	Q08969	168 aa		1.45	□□□□□ -2.18
NCL1	YBL024W	CDC8	P00572	216 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	AIM25	P47140	327 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	YNG1	Q08465	219 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	GPM2	Q12008	311 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	USB1	Q12208	290 aa	Known RBP	1.44	□□□□□ -2.18
NCL1	YBL024W	KOG1	P38873	1557 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	FKS1	P38631	1876 aa	Known RBP	1.44	□□□□□ -2.18
NCL1	YBL024W	RPL25	P04456	142 aa	Known RBP	1.44	□□□□□ -2.18
NCL1	YBL024W	MRS1	P07266	363 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	ATP7	P30902	174 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	CLB6	P32943	380 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	RMD6	P39975	231 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	YIL001W	P40560	513 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	PRM10	P42946	383 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	MNN5	P46982	586 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	DIA1	P54005	336 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	YPL162C	Q12042	273 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	MCP1	Q12106	302 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	MDM32	Q12171	622 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	MHT1	Q12525	324 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	YFR032C-B	Q8TGU2	87 aa		1.44	□□□□□ -2.18
NCL1	YBL024W	MSW1	P04803	379 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	UTR5	P32630	166 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	YHR180W	P38868	163 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	HOP2	P53187	214 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	COG5	P53951	403 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	SPG3	Q04398	127 aa	Predicted RBP	1.43	□□□□□ -2.18
NCL1	YBL024W	PUT1	P09368	476 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	ERG10	P41338	398 aa	Known RBP	1.43	□□□□□ -2.18
NCL1	YBL024W	YDR249C	Q03787	373 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	ARO80	Q04052	950 aa		1.43	□□□□□ -2.18
NCL1	YBL024W	KSS1	P14681	368 aa		1.42	□□□□□ -2.18
NCL1	YBL024W	AST2	P39945	430 aa	Known RBP	1.42	□□□□□ -2.18
NCL1	YBL024W	YER034W	P40022	185 aa	Known RBP	1.42	□□□□□ -2.18
NCL1	YBL024W	HMF1	P40037	129 aa	Known RBP	1.42	□□□□□ -2.18
NCL1	YBL024W	NEJ1	Q06148	342 aa		1.42	□□□□□ -2.18
NCL1	YBL024W	ATO3	Q12359	275 aa		1.42	□□□□□ -2.18
NCL1	YBL024W	MAG1	P22134	296 aa	Known RBP	1.41	□□□□□ -2.18
NCL1	YBL024W	YOR062C	P36025	268 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	AIF1	P52923	378 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	SWP1	Q02795	286 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	EMC6	Q12431	108 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	IGO2	Q9P305	131 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	IKI3	Q06706	1349 aa	Known RBP	1.41	□□□□□ -2.18
NCL1	YBL024W	SIR2	P06700	562 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	RPB3	P16370	318 aa	Known RBP	1.41	□□□□□ -2.18
NCL1	YBL024W	BET1	P22804	142 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	SKG1	P36169	355 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	MRPL17	P36528	281 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	SEC72	P39742	193 aa	Known RBP	1.41	□□□□□ -2.18
NCL1	YBL024W	YGR219W	P53307	113 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	RGM1	Q00453	211 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	SNO1	Q03144	224 aa		1.41	□□□□□ -2.18
NCL1	YBL024W	NOC4	Q06512	552 aa	Predicted RBP	1.41	□□□□□ -2.18
NCL1	YBL024W	TIM9	O74700	87 aa		1.4	□□□□□ -2.19
NCL1	YBL024W	MEI4	P29467	408 aa		1.4	□□□□□ -2.19
NCL1	YBL024W	RME1	P32338	300 aa	Known RBP	1.4	□□□□□ -2.19
NCL1	YBL024W	EGD2	P38879	174 aa	Known RBP	1.4	□□□□□ -2.19
NCL1	YBL024W	CIS3	P47001	227 aa		1.4	□□□□□ -2.19
NCL1	YBL024W	UBC12	P52491	188 aa		1.4	□□□□□ -2.19
NCL1	YBL024W	YNL184C	P53876	108 aa		1.4	□□□□□ -2.19
NCL1	YBL024W	CGI121	Q03705	181 aa	Known RBP	1.4	□□□□□ -2.19
NCL1	YBL024W	MRPS8	Q03799	155 aa		1.4	□□□□□ -2.19
NCL1	YBL024W	RAS2	P01120	322 aa	Known RBP	1.39	□□□□□ -2.19
NCL1	YBL024W	ATP15	P21306	62 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	CNB1	P25296	175 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.39	□□□□□ -2.19	not detected
NCL1	YBL024W	CAF4	P36130	643 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	POG1	P40473	351 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	ICE2	P40499	491 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	DAN1	P47178	298 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	NRK1	P53915	240 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	PRM15	Q03262	622 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	GRX8	Q05926	109 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	YOL024W	Q08172	172 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	TSC3	Q3E790	80 aa		1.39	□□□□□ -2.19
NCL1	YBL024W	URA5	P13298	226 aa	Known RBP	1.39	□□□□□ -2.19
NCL1	YBL024W	PET9	P18239	318 aa	Known RBP	1.39	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms