RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 SEC4P07560 215 aaKnown RBP5.12□□□□□ -1.59
NME1NME1 RPL27AP0C2H6 136 aaKnown RBP5.12□□□□□ -1.59
NME1NME1 RPL27BP0C2H7 136 aaKnown RBP5.12□□□□□ -1.59
NME1NME1 YPK2P18961 677 aa5.12□□□□□ -1.59
NME1NME1 YGR219WP53307 113 aa5.12□□□□□ -1.59
NME1NME1 GAS3Q03655 524 aa5.12□□□□□ -1.59
NME1NME1 NEJ1Q06148 342 aa5.12□□□□□ -1.59
NME1NME1 YCL012CQ8J0M4 134 aa5.12□□□□□ -1.59
NME1NME1 GIM3P53900 129 aa5.11□□□□□ -1.59
NME1NME1 SNZ1Q03148 297 aa5.11□□□□□ -1.59
NME1NME1 MDM32Q12171 622 aa5.11□□□□□ -1.59
NME1NME1 MER1P16523 270 aa5.1□□□□□ -1.59
NME1NME1 SKG1P36169 355 aa5.1□□□□□ -1.59
NME1NME1 TRM12Q04235 462 aa5.1□□□□□ -1.59
NME1NME1 REP2P03872 296 aa5.09□□□□□ -1.59
NME1NME1 YLR156WP0CE96 114 aa5.09□□□□□ -1.59
NME1NME1 YLR159WP0CE97 114 aa5.09□□□□□ -1.59
NME1NME1 YLR161WP0CE98 114 aa5.09□□□□□ -1.59
NME1NME1 MDH3P32419 343 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
NME1NME1 CIS3P47001 227 aa5.09□□□□□ -1.59
NME1NME1 NOP19P53317 196 aaPredicted RBP5.09□□□□□ -1.59
NME1NME1 CDC7P06243 507 aa5.08□□□□□ -1.6
NME1NME1 MRPL28P36527 147 aa5.08□□□□□ -1.6
NME1NME1 LSM7P53905 115 aaKnown RBP5.08□□□□□ -1.6
NME1NME1 QCR7P00128 127 aa5.07□□□□□ -1.6
NME1NME1 RPL25P04456 142 aaKnown RBP5.07□□□□□ -1.6
NME1NME1 PTM1P32857 523 aa5.07□□□□□ -1.6
NME1NME1 YHR180WP38868 163 aa5.07□□□□□ -1.6
NME1NME1 AST2P39945 430 aaKnown RBP5.07□□□□□ -1.6
NME1NME1 YRB2P40517 327 aa5.07□□□□□ -1.6
NME1NME1 YGR050CP53231 118 aa5.07□□□□□ -1.6
NME1NME1 DAD3P69850 94 aa5.07□□□□□ -1.6
NME1NME1 PET191Q02772 108 aa5.07□□□□□ -1.6
NME1NME1 YHR214C-EQ8TGK0 99 aa5.07□□□□□ -1.6
NME1NME1 RAD9P14737 1309 aa5.06□□□□□ -1.6
NME1NME1 IGO1P53897 168 aa5.06□□□□□ -1.6
NME1NME1 MRPS8Q03799 155 aa5.06□□□□□ -1.6
NME1NME1 PEX4P29340 183 aa5.05□□□□□ -1.6
NME1NME1 DAN1P47178 298 aa5.05□□□□□ -1.6
NME1NME1 AIF1P52923 378 aa5.05□□□□□ -1.6
NME1NME1 PRM10P42946 383 aa5.04□□□□□ -1.6
NME1NME1 MMS2P53152 137 aa5.04□□□□□ -1.6
NME1NME1 YPL162CQ12042 273 aa5.03□□□□□ -1.6
NME1NME1 FBA1P14540 359 aaKnown RBP5.01□□□□□ -1.61
NME1NME1 KSS1P14681 368 aa5.01□□□□□ -1.61
NME1NME1 MAG1P22134 296 aaKnown RBP5.01□□□□□ -1.61
NME1NME1 SEC17P32602 292 aa5.01□□□□□ -1.61
NME1NME1 UTP30P36144 274 aaKnown RBP5.01□□□□□ -1.61
NME1NME1 ERV15P38312 142 aa5.01□□□□□ -1.61
NME1NME1 PGD1P40356 397 aa5.01□□□□□ -1.61
NME1NME1 SWP1Q02795 286 aa5.01□□□□□ -1.61
NME1NME1 ATG38Q05789 226 aaKnown RBP5.01□□□□□ -1.61
NME1NME1 MEU1Q07938 337 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
NME1NME1 MRPS28P21771 286 aa5□□□□□ -1.61
NME1NME1 COG5P53951 403 aa5□□□□□ -1.61
NME1NME1 TSC3Q3E790 80 aa5□□□□□ -1.61
NME1NME1 SCL1P21243 252 aaKnown RBP4.99□□□□□ -1.61
NME1NME1 MEI4P29467 408 aa4.99□□□□□ -1.61
NME1NME1 PHO88P38264 188 aaPredicted RBP4.99□□□□□ -1.61
NME1NME1 YKE4P40544 346 aa4.99□□□□□ -1.61
NME1NME1 YJL027CP47063 138 aaPredicted RBP4.99□□□□□ -1.61
NME1NME1 AIM25P47140 327 aa4.99□□□□□ -1.61
NME1NME1 SPG3Q04398 127 aaPredicted RBP4.99□□□□□ -1.61
NME1NME1 YOL160WQ08321 113 aa4.99□□□□□ -1.61
NME1NME1 MCP1Q12106 302 aa4.99□□□□□ -1.61
NME1NME1 USB1Q12208 290 aaKnown RBP4.99□□□□□ -1.61
NME1NME1 HMF1P40037 129 aaKnown RBP4.98□□□□□ -1.61
NME1NME1 NRG2P38082 220 aa4.97□□□□□ -1.61
NME1NME1 RPL33BP41056 107 aaKnown RBP4.97□□□□□ -1.61
NME1NME1 APA2P22108 325 aa4.96□□□□□ -1.62
NME1NME1 BET1P22804 142 aa4.96□□□□□ -1.62
NME1NME1 ERG25P53045 309 aa4.96□□□□□ -1.62
NME1NME1 YDR249CQ03787 373 aa4.96□□□□□ -1.62
NME1NME1 URA5P13298 226 aaKnown RBP4.95□□□□□ -1.62
NME1NME1 ICE2P40499 491 aa4.95□□□□□ -1.62
NME1NME1 YFR032C-BQ8TGU2 87 aa4.95□□□□□ -1.62
NME1NME1 MRPL17P36528 281 aa4.94□□□□□ -1.62
NME1NME1 YNR062CP53748 327 aa4.94□□□□□ -1.62
NME1NME1 TIM9O74700 87 aa4.93□□□□□ -1.62
NME1NME1 ADE1P27616 306 aa4.93□□□□□ -1.62
NME1NME1 YNG1Q08465 219 aa4.93□□□□□ -1.62
NME1NME1 SAC3P46674 1301 aa4.93□□□□□ -1.62
NME1NME1 YIL177CP40434 1758 aa4.92□□□□□ -1.62
NME1NME1 YJL225CP40889 1758 aa4.92□□□□□ -1.62
NME1NME1 PET9P18239 318 aaKnown RBP4.92□□□□□ -1.62
NME1NME1 HOP2P53187 214 aa4.92□□□□□ -1.62
NME1NME1 YHR086W-AQ3E746 53 aa4.92□□□□□ -1.62
NME1NME1 CHD1P32657 1468 aa4.92□□□□□ -1.62
NME1NME1 IKI3Q06706 1349 aaKnown RBP4.92□□□□□ -1.62
NME1NME1 MRS1P07266 363 aa4.91□□□□□ -1.62
NME1NME1 FCY21P40039 528 aa4.91□□□□□ -1.62
NME1NME1 GGA1Q06336 557 aa4.91□□□□□ -1.62
NME1NME1 GPM2Q12008 311 aa4.91□□□□□ -1.62
NME1NME1 SIR2P06700 562 aa4.9□□□□□ -1.63
NME1NME1 RPB3P16370 318 aaKnown RBP4.9□□□□□ -1.63
NME1NME1 UMP1P38293 148 aa4.9□□□□□ -1.63
NME1NME1 CYT2Q00873 224 aa4.9□□□□□ -1.63
NME1NME1 RAS2P01120 322 aaKnown RBP4.89□□□□□ -1.63
NME1NME1 YHR022CP38763 256 aa4.89□□□□□ -1.63
NME1NME1 TIR3P40552 269 aa4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms