RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 TRIM43BA6NCK2 446 aa17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 CDC25BP30305 580 aa17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 PTPN7P35236 360 aa17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 NUP62P37198 522 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 CDK8P49336 464 aa17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 HNRNPH2P55795 449 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 TMC4Q7Z404 712 aa17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 IZUMO1Q8IYV9 350 aa17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 TASP1Q9H6P5 420 aa17.17■□□□□ 0.34
CACNA1A-238ENST00000637276 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 CCR4P51679 360 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 SLC9A2Q9UBY0 812 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 LSM7Q9UK45 103 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 POLR1DQ9Y2S0 133 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 MMP10P09238 476 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 SDC4P31431 198 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 LLGL2Q6P1M3 1020 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 MS4A14Q96JA4 679 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 ST13P50502 369 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 CNGA3Q16281 694 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 RGL4Q8IZJ4 473 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 PCMTD2Q9NV79 361 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 PIPSLA2A3N6 862 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 TEX33O43247 280 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 CAND2O75155 1236 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 ACOT2P49753 483 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 BZW1Q7L1Q6 419 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 SLC7A14Q8TBB6 771 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 TSC22D4Q9Y3Q8 395 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 POTEFA5A3E0 1075 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 APRTP07741 180 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 POTEIP0CG38 1075 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 POTEGQ6S5H5 508 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 POTEEQ6S8J3 1075 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 CCDC3Q9BQI4 270 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 KIFC1Q9BW19 673 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 KRT75O95678 551 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 HSD3B2P26439 372 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 TM6SF1Q9BZW5 370 aa17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 ELL3Q9HB65 397 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-238ENST00000637276 TRIM3O75382 744 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 DGKKQ5KSL6 1271 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 SFR1Q86XK3 245 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 PHLPP2Q6ZVD8 1323 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 PDHA2P29803 388 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ADD2P35612 726 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ALDH1A3P47895 512 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ARSEP51690 589 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ADCY2Q08462 1091 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 EPS8Q12929 822 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 CDR2LQ86X02 465 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ACTR5Q9H9F9 607 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 TOPORSQ9NS56 1045 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ARHGEF38Q9NXL2 777 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 AP3B1O00203 1094 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 APBA1Q02410 837 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 GCOM2Q9BZD3 368 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 CNOT10Q9H9A5 744 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 CPA2P48052 419 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 TP53BP2Q13625 1128 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 TTLL4Q14679 1199 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 STARD3Q14849 445 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 RCN1Q15293 331 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 TAF13Q15543 124 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 IRAK1BP1Q5VVH5 260 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ISLR2Q6UXK2 745 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 B3GALNT2Q8NCR0 500 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 WNK4Q96J92 1243 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 TMA7Q9Y2S6 64 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 ECE2O60344 883 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 KRT37O76014 449 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 PMS2P54278 862 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 MCTP2Q6DN12 878 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 MACC1Q6ZN28 852 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 MAFFQ9ULX9 164 aa17.15■□□□□ 0.34
CACNA1A-238ENST00000637276 USP17L10C9JJH3 530 aa17.14■□□□□ 0.34
CACNA1A-238ENST00000637276 TIPRLO75663 272 aa17.14■□□□□ 0.34
CACNA1A-238ENST00000637276 KRT33AO76009 404 aa17.14■□□□□ 0.34
CACNA1A-238ENST00000637276 CRKP46108 304 aa17.14■□□□□ 0.34
CACNA1A-238ENST00000637276 CYP4X1Q8N118 509 aa17.14■□□□□ 0.34
CACNA1A-238ENST00000637276 ATPAF2Q8N5M1 289 aa17.14■□□□□ 0.34
CACNA1A-238ENST00000637276 COPS7BQ9H9Q2 264 aaPredicted RBP17.14■□□□□ 0.34
CACNA1A-238ENST00000637276 SEMA3EO15041 775 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 FBXO38Q6PIJ6 1188 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 RNF149Q8NC42 400 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 ZNF564Q8TBZ8 553 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 MIR1-1HGQ9H1L0 117 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 PI4KBQ9UBF8 816 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 PCCAP05165 728 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 EIF3EP60228 445 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 GSTA3Q16772 222 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 KLF6Q99612 283 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms