RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 IFT74Q96LB3 600 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 PPP1R10Q96QC0 940 aaKnown RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 MTMR9Q96QG7 549 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 NACC1Q96RE7 527 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 KIFC3Q9BVG8 833 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 CCDC113Q9H0I3 377 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 CHRDQ9H2X0 955 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 CYP4F11Q9HBI6 524 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 TUFT1Q9NNX1 390 aa8.59□□□□□ -1.03
CLK1-215ENST00000621181 AVENQ9NQS1 362 aaPredicted RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 TOPORSQ9NS56 1045 aaPredicted RBP8.59□□□□□ -1.03
CLK1-215ENST00000621181 MAP1BP46821 2468 aaKnown RBP8.58□□□□□ -1.04
CLK1-215ENST00000621181 ARHGEF37A1IGU5 675 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 WDR27A2RRH5 827 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 WNT7AO00755 349 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 MED24O75448 989 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 CTDNEP1O95476 244 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 PSMC3P17980 439 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 CYP11B2P19099 503 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 TGM1P22735 817 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 MCM7P33993 719 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 CCR3P51677 355 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 EFNA5P52803 228 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 FOSBP53539 338 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 ZNF445P59923 1031 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 TRIM29Q14134 588 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 FAM78AQ5JUQ0 283 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 CYP4A22Q5TCH4 519 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 LAIR1Q6GTX8 287 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 IQCEQ6IPM2 695 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 SLC8B1Q6J4K2 584 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 DIS3L2Q8IYB7 885 aaKnown RBP8.58□□□□□ -1.04
CLK1-215ENST00000621181 ERMNQ8TAM6 284 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 FAM3CQ92520 227 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 TCEAL4Q96EI5 215 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 IER2Q9BTL4 223 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 SLITRK6Q9H5Y7 841 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 PARD6AQ9NPB6 346 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 SLC38A7Q9NVC3 462 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 NUB1Q9Y5A7 615 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.58□□□□□ -1.04
CLK1-215ENST00000621181 PIAS3Q9Y6X2 628 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 CHD8Q9HCK8 2581 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 SDK1Q7Z5N4 2213 aa8.58□□□□□ -1.04
CLK1-215ENST00000621181 CNOT1A5YKK6 2376 aaKnown RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 RALGAPA1Q6GYQ0 2036 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 SHISA7A6NL88 538 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 ABLIM3O94929 683 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 EDN1P05305 212 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 FCARP24071 287 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 GDI1P31150 447 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 CLCN1P35523 988 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 OSTNP61366 133 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 ANKRD1Q15327 319 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 PRSS36Q5K4E3 855 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 POLR3CQ9BUI4 534 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 CCDC94Q9BW85 323 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 TMEM60Q9H2L4 133 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 LMAN1LQ9HAT1 526 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 BOLA1Q9Y3E2 137 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 INSL5Q9Y5Q6 135 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 KMT2BQ9UMN6 2715 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 H7C4K7 107 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 K7ERI5 159 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 PODXLO00592 558 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 ZNF263O14978 683 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 SYN3O14994 580 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 MICAL2O94851 1124 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 ADRB1P08588 477 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 FDPSP14324 419 aaKnown RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 CCNE1P24864 410 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 RPA1P27694 616 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 CCR2P41597 374 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 CXCL12P48061 93 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 SOX4Q06945 474 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 SIM2Q14190 667 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 ZNF568Q3ZCX4 644 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 CTXN3Q4LDR2 81 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 PPM1JQ5JR12 505 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 HAUS3Q68CZ6 603 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 CD300LGQ6UXG3 332 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 VITQ6UXI7 678 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 MAMSTRQ6ZN01 415 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 MAP4K3Q8IVH8 894 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 TCEAL8Q8IYN2 117 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 CEP120Q8N960 986 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 NETO1Q8TDF5 533 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 DEPDC1BQ8WUY9 529 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 SMARCD2Q92925 531 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 TMX3Q96JJ7 454 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 ZNF512Q96ME7 567 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 PPP1R9BQ96SB3 815 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 POLD4Q9HCU8 107 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 ZNF334Q9HCZ1 680 aaPredicted RBP8.57□□□□□ -1.04
CLK1-215ENST00000621181 ASAH2Q9NR71 780 aa8.57□□□□□ -1.04
CLK1-215ENST00000621181 TICRRQ7Z2Z1 1910 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms