RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 WDR24Q96S15 920 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 SMARCAD1Q9H4L7 1026 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 SRP72O76094 671 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 HMOX2P30519 316 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 GTF2H1P32780 548 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 FBXW4P57775 412 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 GUCY1A3Q02108 690 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ILF2Q12905 390 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 PDAP1Q13442 181 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 SNRNP35Q16560 246 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZNF746Q6NUN9 644 aaPredicted RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 C16orf86Q6ZW13 317 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 GLYCTKQ8IVS8 523 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 APBB2Q92870 758 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 FAR2Q96K12 515 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZNF556Q9HAH1 456 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 SARS2Q9NP81 518 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 TRPC5OSA6NMA1 111 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 C19orf81C9J6K1 198 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CYP27B1O15528 508 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PPP1R37O75864 691 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZNF543Q08ER8 600 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 NCOA4Q13772 614 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 DCAF4L1Q3SXM0 396 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 KBTBD12Q3ZCT8 623 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 LONP2Q86WA8 852 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 OR6P1Q8NGX9 317 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZNF473Q8WTR7 871 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 VPS33BQ9H267 617 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 FLT1P17948 1338 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 TEX33O43247 280 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 GAS2O43903 313 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 ARIH2O95376 493 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 RALBP11234 206 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 S100A5P33763 92 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ITIH4Q14624 930 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZNF394Q53GI3 561 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CCDC92Q53HC0 331 aaPredicted RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 SEPT12Q8IYM1 358 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 SYNE4Q8N205 404 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CASS4Q9NQ75 786 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 F5H6K3 240 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PRDX5P30044 214 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 FNTAP49354 379 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 KLRC3Q07444 240 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 STX3Q13277 289 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PTK6Q13882 451 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZC3H12BQ5HYM0 836 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 TAGAPQ8N103 731 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 DAGLBQ8NCG7 672 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 SH3KBP1Q96B97 665 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 RMDN1Q96DB5 314 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 THOC1Q96FV9 657 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 RBM15Q96T37 977 aaKnown RBP eCLIP4.79□□□□□ -1.643e-6■■■□□ 18.1
CHD9-221ENST00000615216 KCNH4Q9UQ05 1017 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 USP27XA6NNY8 438 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZNF263O14978 683 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PJA2O43164 708 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CYP26A1O43174 497 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 KDM1AO60341 852 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 TDP2O95551 362 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CYBBP04839 570 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 TRIM49P0CI25 452 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 TRIM49CP0CI26 452 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CASP1P29466 404 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 GRIK1P39086 918 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PLA2G4AP47712 749 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ACTR2P61160 394 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 XKR3Q5GH77 459 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 AARS2Q5JTZ9 985 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 PLD3Q8IV08 490 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 SRBD1Q8N5C6 995 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 MCEEQ96PE7 176 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ZBED2Q9BTP6 218 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CCDC134Q9H6E4 229 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 NPHS2Q9NP85 383 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 KRCC1Q9NPI7 259 aaPredicted RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 IL1RAPL1Q9NZN1 696 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 INPP5FQ9Y2H2 1132 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CD163L1Q9NR16 1453 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ENO1P06733 434 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 FDFT1P37268 417 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 PTK7Q13308 1070 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CENPPQ6IPU0 288 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 LVRNQ6Q4G3 990 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ADCK1Q86TW2 530 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 MMGT1Q8N4V1 131 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 OR6J1Q8NGC5 347 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 KCNV2Q8TDN2 545 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 ELMO2Q96JJ3 720 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 CRAMP1Q96RY5 1269 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 SUFUQ9UMX1 484 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 NEU2Q9Y3R4 380 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 COPG1Q9Y678 874 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.79□□□□□ -1.64
CHD9-221ENST00000615216 SPDYE5A6NIY4 337 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 MAFGO15525 162 aa4.79□□□□□ -1.64
CHD9-221ENST00000615216 POLBP06746 335 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms