RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 ANKRD20A12PQ8NF67 263 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 CXorf38Q8TB03 319 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 GOLGA2P5Q9HBQ8 144 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 C5orf67F2Z3F1 127 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 P4HA2O15460 535 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 TRIM49P0CI25 452 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 TRIM49CP0CI26 452 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 CDK11BP21127 795 aaKnown RBP18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 TPM4P67936 248 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 RBP5P82980 135 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 KCNH2Q12809 1159 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 MAN2A1Q16706 1144 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 DCAF17Q5H9S7 520 aaPredicted RBP18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 TIFAQ96CG3 184 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 PAAF1Q9BRP4 392 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 TUBGCP2Q9BSJ2 902 aa18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 R3HCC1Q9Y3T6 440 aaKnown RBP18.41■□□□□ 0.54
RPRD1A-209ENST00000590898 PODXLO00592 558 aa18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 N4BP1O75113 896 aaKnown RBP18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 PTMAP06454 111 aaKnown RBP18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 GCLMP48507 274 aa18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 LRRC52Q8N7C0 313 aa18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 NKX2-4Q9H2Z4 354 aa18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 SPG21Q9NZD8 308 aa18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 STK39Q9UEW8 545 aa18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 COQ4Q9Y3A0 265 aa18.4■□□□□ 0.54
RPRD1A-209ENST00000590898 B3GAT3O94766 335 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 AFPP02771 609 aaKnown RBP18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 ITGB3P05106 788 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 PNPLA4P41247 253 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 GUCY2FP51841 1108 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 TDRD10Q5VZ19 366 aaKnown RBP18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 PPP2R2DQ66LE6 453 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 SLC39A11Q8N1S5 342 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 IGSF21Q96ID5 467 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 LIMA1Q9UHB6 759 aaKnown RBP18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 SIX4Q9UIU6 781 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 TMEM265A0A087WTH1 108 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 ARHGEF15O94989 841 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 CST3P01034 146 aaPredicted RBP18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 ATICP31939 592 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 FMO5P49326 533 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 MXI1P50539 228 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 PLCB3Q01970 1234 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 BIRC3Q13489 604 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 EPC2Q52LR7 807 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 XPO4Q9C0E2 1151 aaKnown RBP18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 IFNKQ9P0W0 207 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 ADAM28Q9UKQ2 775 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 AGAP1Q9UPQ3 857 aa18.39■□□□□ 0.53
RPRD1A-209ENST00000590898 PHACTR2O75167 634 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 TADA2AO75478 443 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 STAU1O95793 577 aaKnown RBP18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 LILRA4P59901 499 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 CETN1Q12798 172 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 TRPC3Q13507 836 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 KRT31Q15323 416 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 ZNF560Q96MR9 790 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 C17orf80Q9BSJ5 609 aa18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 PRG3Q9Y2Y8 225 aaPredicted RBP18.38■□□□□ 0.53
RPRD1A-209ENST00000590898 TRANK1O15050 2925 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 NT5C1B-RDH14C9J2C7 533 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 TRAPPC3O43617 180 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 TPM2P07951 284 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 KRT19P08727 400 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 CTNNB1P35222 781 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 AARSP49588 968 aaKnown RBP eCLIP18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 FANCCQ00597 558 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 KRT17Q04695 432 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 ELAVL2Q12926 359 aaKnown RBP18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 MYO1EQ12965 1108 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 NCOA4Q13772 614 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 SGSM1Q2NKQ1 1148 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 CBWD6Q4V339 395 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 VWA3BQ502W6 1294 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 CBWD3Q5JTY5 395 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 CBWD5Q5RIA9 395 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 CD300LGQ6UXG3 332 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 FBXL13Q8NEE6 735 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 FAM84AQ96KN4 292 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 ZNF830Q96NB3 372 aaPredicted RBP18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 NDST4Q9H3R1 872 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 VRTNQ9H8Y1 702 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 MARCH5Q9NX47 278 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 CACNG4Q9UBN1 327 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 GTPBP10A4D1E9 387 aaKnown RBP18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 KIF4AO95239 1232 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 VNN1O95497 513 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 EFEMP2O95967 443 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 PBX3P40426 434 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 TAF6P49848 677 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 UBE3AQ05086 875 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 MIIPQ5JXC2 388 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 KLHL23Q8NBE8 558 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 C3orf58Q8NDZ4 430 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 TAF4BQ92750 862 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
RPRD1A-209ENST00000590898 C11orf84Q9BUA3 381 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms