RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TIPINQ9BVW5 301 aa14.96□□□□□ -0.01
HDAC5-208ENST00000588419 C17orf75Q9HAS0 396 aa14.96□□□□□ -0.01
HDAC5-208ENST00000588419 LTB4R2Q9NPC1 389 aa14.96□□□□□ -0.01
HDAC5-208ENST00000588419 ARHGEF37A1IGU5 675 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 K7ENM7 598 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 CLDN3O15551 220 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 ECI2O75521 394 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 TOM1L1O75674 476 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 PLA2G4BP0C869 781 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 MAPTP10636 758 aaKnown RBP14.95□□□□□ -0.02
HDAC5-208ENST00000588419 ATF2P15336 505 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 GJA1P17302 382 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 TARSP26639 723 aaKnown RBP14.95□□□□□ -0.02
HDAC5-208ENST00000588419 GJB2P29033 226 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 RPL9P32969 192 aaKnown RBP14.95□□□□□ -0.02
HDAC5-208ENST00000588419 ATP2C1P98194 919 aaPredicted RBP14.95□□□□□ -0.02
HDAC5-208ENST00000588419 CSTF1Q05048 431 aaKnown RBP14.95□□□□□ -0.02
HDAC5-208ENST00000588419 SLC10A6Q3KNW5 377 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 C8orf34Q49A92 452 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 TMEM161BQ8NDZ6 487 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 APPL2Q8NEU8 664 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 SUSD3Q96L08 255 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 PGLYRP2Q96PD5 576 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 ZHX3Q9H4I2 956 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 GDE1Q9NZC3 331 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 NDRG2Q9UN36 371 aaKnown RBP14.95□□□□□ -0.02
HDAC5-208ENST00000588419 TIMM13Q9Y5L4 95 aaPredicted RBP14.95□□□□□ -0.02
HDAC5-208ENST00000588419 SCN1AP35498 2009 aa14.95□□□□□ -0.02
HDAC5-208ENST00000588419 SPTBN4Q9H254 2564 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 TULP1O00294 542 aaPredicted RBP14.94□□□□□ -0.02
HDAC5-208ENST00000588419 KINO60870 393 aaKnown RBP14.94□□□□□ -0.02
HDAC5-208ENST00000588419 ABLIM3O94929 683 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 OR4Q2P0C623 313 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 TNFSF9P41273 254 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 CCR2P41597 374 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 LIG4P49917 911 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 GUCY2FP51841 1108 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 SLC12A3P55017 1021 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 PPP2R3AQ06190 1150 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 PRSS36Q5K4E3 855 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 ZBTB41Q5SVQ8 909 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 CYP4A22Q5TCH4 519 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 POTEHQ6S545 545 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 DSTYKQ6XUX3 929 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 RNF19BQ6ZMZ0 732 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 RTL10Q7L3V2 364 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 SYT2Q8N9I0 419 aaPredicted RBP14.94□□□□□ -0.02
HDAC5-208ENST00000588419 SPIRE2Q8WWL2 714 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 ZNF512Q96ME7 567 aaPredicted RBP14.94□□□□□ -0.02
HDAC5-208ENST00000588419 SEMA4AQ9H3S1 761 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 BRD9Q9H8M2 597 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 ZFP14Q9HCL3 533 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 ASAH2Q9NR71 780 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 DAXXQ9UER7 740 aaPredicted RBP14.94□□□□□ -0.02
HDAC5-208ENST00000588419 PCDHB8Q9UN66 801 aa14.94□□□□□ -0.02
HDAC5-208ENST00000588419 NRG2O14511 850 aaPredicted RBP14.93□□□□□ -0.02
HDAC5-208ENST00000588419 ZNF197O14709 1029 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 HNRNPDLO14979 420 aaKnown RBP14.93□□□□□ -0.02
HDAC5-208ENST00000588419 KRT18P05783 430 aaKnown RBP14.93□□□□□ -0.02
HDAC5-208ENST00000588419 YWHAHQ04917 246 aaPredicted RBP14.93□□□□□ -0.02
HDAC5-208ENST00000588419 RABEP1Q15276 862 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 FAM78AQ5JUQ0 283 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 TPGS2Q68CL5 300 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 TSSK4Q6SA08 328 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 ZNF852Q6ZMS4 543 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 GPBP1Q86WP2 473 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 TCEAL8Q8IYN2 117 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 DCLK2Q8N568 766 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 ELSPBP1Q96BH3 223 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 DDX23Q9BUQ8 820 aaKnown RBP14.93□□□□□ -0.02
HDAC5-208ENST00000588419 HAPLN2Q9GZV7 340 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 LARSQ9P2J5 1176 aaKnown RBP14.93□□□□□ -0.02
HDAC5-208ENST00000588419 AFF4Q9UHB7 1163 aaKnown RBP14.93□□□□□ -0.02
HDAC5-208ENST00000588419 YIPF1Q9Y548 306 aa14.93□□□□□ -0.02
HDAC5-208ENST00000588419 RALGAPA1Q6GYQ0 2036 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 TBC1D4O60343 1298 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 FAM13AO94988 1023 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 FCARP24071 287 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 GDI1P31150 447 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 CDR1P51861 262 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 MCL1Q07820 350 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 MRPL58Q14197 206 aaKnown RBP14.92□□□□□ -0.02
HDAC5-208ENST00000588419 TEAD2Q15562 447 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 TMEM119Q4V9L6 283 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 HYIQ5T013 277 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 ZPBP2Q6X784 338 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 HAUS6Q7Z4H7 955 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 USP37Q86T82 979 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 MAML2Q8IZL2 1156 aaPredicted RBP14.92□□□□□ -0.02
HDAC5-208ENST00000588419 MYCT1Q8N699 235 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 CALML4Q96GE6 196 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 REEP2Q9BRK0 252 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 TRMT61BQ9BVS5 477 aaKnown RBP14.92□□□□□ -0.02
HDAC5-208ENST00000588419 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
HDAC5-208ENST00000588419 CEP72Q9P209 647 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 NCDNQ9UBB6 729 aa14.92□□□□□ -0.02
HDAC5-208ENST00000588419 KCNG1Q9UIX4 513 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms