RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 GUCY2FP51841 1108 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 MTTPP55157 894 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 BPIFB4P59827 614 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 TMF1P82094 1093 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 PRR5P85299 388 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CAP1Q01518 475 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 KLC1Q07866 573 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 ZBTB17Q13105 803 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 ADAM9Q13443 819 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 SQSTM1Q13501 440 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 TARBP2Q15633 366 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 BCL2A1Q16548 175 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 PTGISQ16647 500 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CCDC14Q49A88 953 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 HABP4Q5JVS0 413 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 SPDYCQ5MJ68 293 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CCDC122Q5T0U0 273 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 GRAMD4Q6IC98 578 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 NEPROQ6NW34 567 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 IRGCQ6NXR0 463 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 KLC3Q6P597 504 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 Q6ZUG5 572 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 C3orf62Q6ZUJ4 267 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 MIB1Q86YT6 1006 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 RNF10Q8N5U6 811 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CNBD1Q8NA66 436 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 UHMK1Q8TAS1 419 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 MYCBPAPQ8TBZ2 947 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 PHOSPHO1Q8TCT1 267 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 ACMSDQ8TDX5 336 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 DQX1Q8TE96 717 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 MZB1Q8WU39 189 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CCDC12Q8WUD4 166 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 GSDMAQ96QA5 445 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CCT8L2Q96SF2 557 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 NAA15Q9BXJ9 866 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CLK4Q9HAZ1 481 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 PARVBQ9HBI1 364 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 NCOA5Q9HCD5 579 aaKnown RBP6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CLDND1Q9NY35 253 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 DACT1Q9NYF0 836 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 SEPT10Q9P0V9 454 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 CTTNBP2NLQ9P2B4 639 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 PDP2Q9P2J9 529 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 L3MBTL1Q9Y468 752 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 LRRC42Q9Y546 428 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 COMMD3-BMI1R4GMX3 469 aa6.59□□□□□ -1.35
SMAD4-203ENST00000585448 FANCAO15360 1455 aa6.59□□□□□ -1.36
SMAD4-203ENST00000585448 NRXN1Q9ULB1 1477 aa6.59□□□□□ -1.36
SMAD4-203ENST00000585448 SUPT6HQ7KZ85 1726 aaKnown RBP6.59□□□□□ -1.36
SMAD4-203ENST00000585448 CTAGE9A4FU28 777 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 C5orf60A6NFR6 353 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 TRIM64CA6NLI5 447 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 TTC34A8MYJ7 566 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 FAM25EA8MYX2 175 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 BTBD19C9JJ37 291 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 FAM47E-STBD1D6RA91 191 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 PPIP5K2O43314 1243 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 MAFKO60675 156 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 DGKIO75912 1065 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 TSPY4P0CV99 314 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 TSPY10P0CW01 314 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 GSPT1P15170 499 aaKnown RBP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 S100A5P33763 92 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 STAT6P42226 847 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 USP14P54578 494 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 DMPKQ09013 629 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 ADRM1Q16186 407 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 ANKRD20A2Q5SQ80 823 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 ANKRD20A1Q5TYW2 823 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 ANKRD20A3Q5VUR7 823 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 TBC1D9BQ66K14 1250 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 TMEM132EQ6IEE7 984 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 EXOC3L1Q86VI1 746 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 CILP2Q8IUL8 1156 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 WDR75Q8IWA0 830 aaKnown RBP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 CCDC83Q8IWF9 413 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 DHX40Q8IX18 779 aaKnown RBP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 FAM186BQ8IYM0 893 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 CACNA2D3Q8IZS8 1091 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 SCAIQ8N9R8 606 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 CCDC110Q8TBZ0 833 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 DIS3LQ8TF46 1054 aaKnown RBP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 APPBP2Q92624 585 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 IQCDQ96DY2 449 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 EPSTI1Q96J88 318 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 RNPC3Q96LT9 517 aaKnown RBP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 ZSCAN31Q96LW9 406 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 CCT7Q99832 543 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 KRTAP4-12Q9BQ66 201 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 ALG1Q9BT22 464 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 RTFDC1Q9BY42 306 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-203ENST00000585448 NDST4Q9H3R1 872 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 SLC6A20Q9NP91 592 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 RRP7BPQ9NSQ0 103 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 COMMD8Q9NX08 183 aa6.58□□□□□ -1.36
SMAD4-203ENST00000585448 SCOCQ9UIL1 159 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms