RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 CLLU1OSQ5K130 101 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 COL13A1Q5TAT6 717 aaPredicted RBP15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 RAD9BQ6WBX8 426 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 PPM1KQ8N3J5 372 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 ZNF397Q8NF99 534 aaPredicted RBP15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 OLIG1Q8TAK6 271 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 APBB2Q92870 758 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 BAG1Q99933 345 aaPredicted RBP15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 SDCBP2Q9H190 292 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 RSAD1Q9HA92 442 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 PRDM5Q9NQX1 630 aaPredicted RBP15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 ITGA11Q9UKX5 1188 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 UBQLN1Q9UMX0 589 aaKnown RBP15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 POLIQ9UNA4 740 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 TTC3P53804 2025 aa15.41■□□□□ 0.06
SMARCD2-211ENST00000584483 SOWAHDA6NJG2 315 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 F8VZ95 297 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 PIRO00625 290 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 B4GALT3O60512 393 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 EOMESO95936 686 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 FGFR1P11362 822 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 SKIP12755 728 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 CSF2RAP15509 400 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 GATMP50440 423 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 GCNT1Q02742 428 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 TRPC3Q13507 836 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 WDR44Q5JSH3 913 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 SFMBT2Q5VUG0 894 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 C9orf57Q5W0N0 161 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 BEST2Q8NFU1 509 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 SHC3Q92529 594 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 SYN2Q92777 582 aaPredicted RBP15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 PGBD4Q96DM1 585 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 TSPAN18Q96SJ8 248 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 C1orf112Q9NSG2 853 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 MYO6Q9UM54 1294 aa15.4■□□□□ 0.06
SMARCD2-211ENST00000584483 SPTLC1O15269 473 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 GFPT2O94808 682 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 POMCP01189 267 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 CALCAP01258 141 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 RAG1P15918 1043 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 CYP3A5P20815 502 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 CLCN1P35523 988 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 SOX5P35711 763 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 ASPAP45381 313 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 RBP5P82980 135 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 CUL2Q13617 745 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 ZNF699Q32M78 642 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 MFSD5Q6N075 450 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 C16orf59Q7L2K0 433 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 FAM71AQ8IYT1 594 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 HACE1Q8IYU2 909 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 RABGGTAQ92696 567 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 TRIM44Q96DX7 344 aaPredicted RBP15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 HPDLQ96IR7 371 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 SPAG5Q96R06 1193 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 PAAF1Q9BRP4 392 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 VRTNQ9H8Y1 702 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 TMEM161AQ9NX61 479 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 PTPRSQ13332 1948 aa15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 MKI67P46013 3256 aaKnown RBP15.39■□□□□ 0.05
SMARCD2-211ENST00000584483 COL4A6Q14031 1691 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 FNDC1Q4ZHG4 1894 aaPredicted RBP15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 EVI5O60447 810 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 STAU1O95793 577 aaKnown RBP15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 THP07101 528 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 RFX1P22670 979 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 LRPAP1P30533 357 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 ATICP31939 592 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 RFC2P35250 354 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 STAT1P42224 750 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 MFAP3P55082 362 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 CDH8P55286 799 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 CDK17Q00537 523 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 ARID5AQ03989 594 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 ASTE1Q2TB18 679 aaPredicted RBP15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 CNKSR3Q6P9H4 555 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 CD300LGQ6UXG3 332 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 TAF4BQ92750 862 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 SYT11Q9BT88 431 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 BCO2Q9BYV7 579 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 NIF3L1Q9GZT8 377 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 UBN1Q9NPG3 1134 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 ACP6Q9NPH0 428 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 INPP5FQ9Y2H2 1132 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 ZKSCAN5Q9Y2L8 839 aa15.38■□□□□ 0.05
SMARCD2-211ENST00000584483 DDHD2O94830 711 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 WEE2P0C1S8 567 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 ACRP10323 421 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 EIF4A3P38919 411 aaKnown RBP15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 PRKCIP41743 596 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 ASIC2Q16515 512 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 WDR72Q3MJ13 1102 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 CYP26C1Q6V0L0 522 aa15.37■□□□□ 0.05
SMARCD2-211ENST00000584483 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms