RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 CNTN3Q9P232 1028 aa20.69■□□□□ 0.9
PKD1-230ENST00000565639 ST3GAL5Q9UNP4 418 aa20.69■□□□□ 0.9
PKD1-230ENST00000565639 PHF24Q9UPV7 400 aa20.69■□□□□ 0.9
PKD1-230ENST00000565639 CTAGE9A4FU28 777 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 GPR182O15218 404 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 TACC1O75410 805 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 CLSTN1O94985 981 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 ITGB3P05106 788 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 KRT19P08727 400 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 CHRNB2P17787 502 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 TRIM71Q2Q1W2 868 aaKnown RBP20.68■□□□□ 0.9
PKD1-230ENST00000565639 FAM26DQ5JW98 314 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 SH3TC2Q8TF17 1288 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 DDX1Q92499 740 aaKnown RBP20.68■□□□□ 0.9
PKD1-230ENST00000565639 PACSIN1Q9BY11 444 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 SEZ6LQ9BYH1 1024 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 TRMT13Q9NUP7 481 aaKnown RBP20.68■□□□□ 0.9
PKD1-230ENST00000565639 DPP3Q9NY33 737 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 A0A0U1RQG5 324 aaPredicted RBP20.68■□□□□ 0.9
PKD1-230ENST00000565639 RECQL4O94761 1208 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 STAU1O95793 577 aaKnown RBP20.68■□□□□ 0.9
PKD1-230ENST00000565639 GZMAP12544 262 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 ZBTB6Q15916 424 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 TWF2Q6IBS0 349 aaKnown RBP20.68■□□□□ 0.9
PKD1-230ENST00000565639 NAPGQ99747 312 aaPredicted RBP20.68■□□□□ 0.9
PKD1-230ENST00000565639 STARD7Q9NQZ5 370 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 WBP1LQ9NX94 342 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 HES2Q9Y543 173 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 PCDHB4Q9Y5E5 795 aa20.68■□□□□ 0.9
PKD1-230ENST00000565639 KBTBD13C9JR72 458 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 RIOK3O14730 519 aaKnown RBP20.67■□□□□ 0.9
PKD1-230ENST00000565639 YWHAEP62258 255 aaKnown RBP20.67■□□□□ 0.9
PKD1-230ENST00000565639 RBP5P82980 135 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 FMO1Q01740 532 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 XKR4Q5GH76 650 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 ZNF667Q5HYK9 610 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 NOX5Q96PH1 765 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 SEPT11Q9NVA2 429 aaKnown RBP20.67■□□□□ 0.9
PKD1-230ENST00000565639 IPPQ9Y573 584 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 SQORQ9Y6N5 450 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 CENPFP49454 3210 aa20.67■□□□□ 0.9
PKD1-230ENST00000565639 A0A0A6YYK5 440 aaPredicted RBP20.66■□□□□ 0.9
PKD1-230ENST00000565639 HSPA6P17066 643 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 ASPAP45381 313 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 FBXO47Q5MNV8 452 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 TMEM270Q6UE05 265 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 PALB2Q86YC2 1186 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 SMG8Q8ND04 991 aaKnown RBP20.66■□□□□ 0.9
PKD1-230ENST00000565639 ALS2CR12Q96Q35 445 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 UNC93B1Q9H1C4 597 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 ISCUQ9H1K1 167 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 ACP6Q9NPH0 428 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 PAK6Q9NQU5 681 aaPredicted RBP20.66■□□□□ 0.9
PKD1-230ENST00000565639 SALL4Q9UJQ4 1053 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 URI1O94763 535 aaPredicted RBP20.66■□□□□ 0.9
PKD1-230ENST00000565639 TMEM253P0C7T8 217 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 ZNF132P52740 706 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 GALCP54803 685 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 RBBP8NLQ8NC74 664 aaPredicted RBP20.66■□□□□ 0.9
PKD1-230ENST00000565639 MYRIPQ8NFW9 859 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 ZMAT2Q96NC0 199 aaKnown RBP20.66■□□□□ 0.9
PKD1-230ENST00000565639 BCO2Q9BYV7 579 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 CEP350Q5VT06 3117 aa20.66■□□□□ 0.9
PKD1-230ENST00000565639 ANO9A1A5B4 782 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 MOCS3O95396 460 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 MMEP08473 750 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 KCNE1P15382 129 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 POLR2BP30876 1174 aaKnown RBP20.65■□□□□ 0.9
PKD1-230ENST00000565639 NFX1Q12986 1120 aaKnown RBP20.65■□□□□ 0.9
PKD1-230ENST00000565639 TUBB2AQ13885 445 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 TAF3Q5VWG9 929 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 USP38Q8NB14 1042 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 BEST2Q8NFU1 509 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 PCDHB18PQ96TA0 734 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 TUBB2BQ9BVA1 445 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 FAM124BQ9H5Z6 455 aaPredicted RBP20.65■□□□□ 0.9
PKD1-230ENST00000565639 ERVK-5Q9HDB9 667 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 CISHQ9NSE2 258 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 UBQLN1Q9UMX0 589 aaKnown RBP20.65■□□□□ 0.9
PKD1-230ENST00000565639 AGAP1Q9UPQ3 857 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 CAPN6Q9Y6Q1 641 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 TRIP11Q15643 1979 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 ANKRD62A6NC57 917 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 ARVCFO00192 962 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 DNM1LO00429 736 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 RTN2O75298 545 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 P4HA1P13674 534 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 AKAP5P24588 427 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 IFI16Q16666 785 aaKnown RBP20.65■□□□□ 0.9
PKD1-230ENST00000565639 WDR72Q3MJ13 1102 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 HPDLQ96IR7 371 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 APOL6Q9BWW8 343 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 PARP2Q9UGN5 583 aa20.65■□□□□ 0.9
PKD1-230ENST00000565639 XPOTO43592 962 aaKnown RBP20.64■□□□□ 0.89
PKD1-230ENST00000565639 HACE1Q8IYU2 909 aa20.64■□□□□ 0.89
PKD1-230ENST00000565639 CTNNBL1Q8WYA6 563 aaPredicted RBP20.64■□□□□ 0.89
PKD1-230ENST00000565639 TRAIPQ9BWF2 469 aa20.64■□□□□ 0.89
PKD1-230ENST00000565639 RNF39Q9H2S5 420 aa20.64■□□□□ 0.89
PKD1-230ENST00000565639 AGO3Q9H9G7 860 aaKnown RBP20.64■□□□□ 0.89
PKD1-230ENST00000565639 CYP3A43Q9HB55 503 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms