RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 ZMAT2Q96NC0 199 aaKnown RBP12.99□□□□□ -0.33
GABPB1-206ENST00000543881 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
GABPB1-206ENST00000543881 MRPL4Q9BYD3 311 aaKnown RBP12.99□□□□□ -0.33
GABPB1-206ENST00000543881 PLA2G2FQ9BZM2 168 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 RAB23Q9ULC3 237 aa12.99□□□□□ -0.33
GABPB1-206ENST00000543881 MRPS23Q9Y3D9 190 aaKnown RBP12.99□□□□□ -0.33
GABPB1-206ENST00000543881 NPHP3-ACAD11A0A0J9YXS1 232 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 SHISA7A6NL88 538 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 TMEM189-UBE2V1I3L0A0 370 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 B3GAT3O94766 335 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 NRLP54845 237 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 SPEM2Q0P670 501 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 ELAVL2Q12926 359 aaKnown RBP12.98□□□□□ -0.33
GABPB1-206ENST00000543881 RAB33AQ14088 237 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 LPAL2Q16609 132 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 UPP1Q16831 310 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 TMEM119Q4V9L6 283 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 ARSHQ5FYA8 562 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 ARL6IP4Q66PJ3 421 aaKnown RBP12.98□□□□□ -0.33
GABPB1-206ENST00000543881 TMEM161BQ8NDZ6 487 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 C17orf75Q9HAS0 396 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 GDE1Q9NZC3 331 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 SMC3Q9UQE7 1217 aa12.98□□□□□ -0.33
GABPB1-206ENST00000543881 RBM19Q9Y4C8 960 aaKnown RBP12.98□□□□□ -0.33
GABPB1-206ENST00000543881 MAP1BP46821 2468 aaKnown RBP12.98□□□□□ -0.33
GABPB1-206ENST00000543881 I3L4J1 428 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 PLA2G4BP0C869 781 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 MCF2P10911 925 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 TDGF1P13385 188 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 PLS3P13797 630 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 FGFR3P22607 806 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 BRCC3P46736 316 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 MCM2P49736 904 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 GRIN1Q05586 938 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 SLC5A9Q2M3M2 681 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 PPM1JQ5JR12 505 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 MPZL3Q6UWV2 235 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 SPIRE2Q8WWL2 714 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 TIPINQ9BVW5 301 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 UPF2Q9HAU5 1272 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 NDRG2Q9UN36 371 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 RHOP08100 348 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 KCNE1P15382 129 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 TKTP29401 623 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 YARSP54577 528 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 PPP2R5DQ14738 602 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 SEZ6Q53EL9 994 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 LAIR1Q6GTX8 287 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 TANGO2Q6ICL3 276 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 POTEHQ6S545 545 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 APBB1IPQ7Z5R6 666 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 TMEM130Q8N3G9 435 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 KCTD17Q8N5Z5 321 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 CELF5Q8N6W0 485 aaKnown RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 NETO1Q8TDF5 533 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 DNASE1L2Q92874 299 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 C18orf25Q96B23 403 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 ELSPBP1Q96BH3 223 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 UROC1Q96N76 676 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 TCHPQ9BT92 498 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 HAPLN2Q9GZV7 340 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
GABPB1-206ENST00000543881 MTRRQ9UBK8 725 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 CDY1Q9Y6F8 540 aa12.97□□□□□ -0.33
GABPB1-206ENST00000543881 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.96□□□□□ -0.34
GABPB1-206ENST00000543881 MAN2B1O00754 1011 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 SLC30A4O14863 429 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.34
GABPB1-206ENST00000543881 GRM2Q14416 872 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 PRR23BQ6ZRT6 265 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 ZNF687Q8N1G0 1237 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.34
GABPB1-206ENST00000543881 ACAP3Q96P50 834 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 BLOC1S4Q9NUP1 217 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 CNTN3Q9P232 1028 aa12.96□□□□□ -0.34
GABPB1-206ENST00000543881 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.34
GABPB1-206ENST00000543881 PODXLO00592 558 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 TOM1L1O75674 476 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 RETP07949 1114 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 CEBPBP17676 345 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 FCARP24071 287 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 STRN3Q13033 797 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 CUL4AQ13619 759 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 AK8Q96MA6 479 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 IER2Q9BTL4 223 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 BRD9Q9H8M2 597 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms