RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 HTR3DQ70Z44 454 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 NOL8Q76FK4 1167 aaKnown RBP5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 DRC7Q8IY82 874 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 SYNE4Q8N205 404 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 MIER2Q8N344 545 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 STAG1Q8WVM7 1258 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 PLEKHG4BQ96PX9 1271 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZNF341Q9BYN7 854 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 SPON1Q9HCB6 807 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 MAN1C1Q9NR34 630 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 POGKQ9P215 609 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 TRPS1Q9UHF7 1281 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 DAPK1P53355 1430 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 DENND4BO75064 1496 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 MLH3Q9UHC1 1453 aa5.39□□□□□ -1.55
HMGB3P13-201ENST00000511263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 ADCY10Q96PN6 1610 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 TBKBP1A7MCY6 615 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 GABRDO14764 452 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 TRIM24O15164 1050 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 IPO8O15397 1037 aaKnown RBP5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 NDUFS2O75306 463 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 ALAS1P13196 640 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 PTGS2P35354 604 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 IARSP41252 1262 aaKnown RBP5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 CLRN1P58418 232 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 FOXE3Q13461 319 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 VPS72Q15906 364 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 ABCB5Q2M3G0 1257 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 GORABQ5T7V8 394 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZNF572Q7Z3I7 529 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZBTB46Q86UZ6 589 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 MDM1Q8TC05 714 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 TFAP2CQ92754 450 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 CHMP4CQ96CF2 233 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 KLHL42Q9P2K6 505 aa5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 EIF2B4Q9UI10 523 aaKnown RBP5.38□□□□□ -1.55
HMGB3P13-201ENST00000511263 E2F8A0AVK6 867 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 GOLGA6CA6NDK9 693 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 GOLGA6BA6NDN3 693 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 H0YHG0 523 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 KIF3BO15066 747 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 COQ9O75208 318 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 HLA-DOAP06340 250 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 GOLGA6DP0CG33 693 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 ADKP55263 362 aaKnown RBP5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 CREMQ03060 361 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 PRAMEF14Q5SWL7 426 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 CBARPQ8N350 705 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 OR52N2Q8NGI0 321 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 TRIM8Q9BZR9 551 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 GOLGA6AQ9NYA3 693 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 CWC15Q9P013 229 aaKnown RBP5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 SMC3Q9UQE7 1217 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 FRMD4BQ9Y2L6 1034 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 XDHP47989 1333 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 KANK1Q14678 1352 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 IBTKQ9P2D0 1353 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 NAIPQ13075 1403 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 ANKRD50Q9ULJ7 1429 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 ADGRL2O95490 1459 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZNF518AQ6AHZ1 1483 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 KIF14Q15058 1648 aa5.37□□□□□ -1.55
HMGB3P13-201ENST00000511263 SGTAO43765 313 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 MARCH6O60337 910 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 GPR32O75388 356 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 FRAT2O75474 233 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 HSP90AB1P08238 724 aaKnown RBP5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 RAP2AP10114 183 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 ATP5JP18859 108 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 HK1P19367 917 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 SCP2P22307 547 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 MCM7P33993 719 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 RABGGTBP53611 331 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 TUBA3CQ13748 450 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 BMT2Q1RMZ1 405 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 FAM214AQ32MH5 1076 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 RABL3Q5HYI8 236 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 MIIPQ5JXC2 388 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 ATXN7L2Q5T6C5 722 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 THEMIS2Q5TEJ8 643 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 ARMC6Q6NXE6 501 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 TUBA3EQ6PEY2 450 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 RSPH3Q86UC2 560 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 TRMT2AQ8IZ69 625 aaKnown RBP5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 PPM1NQ8N819 430 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 NLGN4YQ8NFZ3 816 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 TBC1D22AQ8WUA7 517 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 JADE3Q92613 823 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 EXTL1Q92935 676 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 SMAD5Q99717 465 aaKnown RBP5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 GRPEL1Q9HAV7 217 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 TDP1Q9NUW8 608 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 OGFRQ9NZT2 677 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 ABCF2Q9UG63 623 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 INTUQ9ULD6 942 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 NUP155O75694 1391 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 RAB3GAP2Q9H2M9 1393 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 PTPRKQ15262 1439 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms