RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PNPLA4P41247 253 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 MTIF2P46199 727 aaKnown RBP12.29□□□□□ -0.44
NUP50-216ENST00000486184 ZNF165P49910 485 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 TPM4P67936 248 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 DLG4P78352 724 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 RBP5P82980 135 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 UBE3AQ05086 875 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 PTPROQ16827 1216 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 SPRED2Q7Z698 418 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 AOPEPQ8N6M6 819 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 ANKRD20A12PQ8NF67 263 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 OR5B17Q8NGF7 314 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 GDPD5Q8WTR4 605 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 CNOT6LQ96LI5 555 aaKnown RBP12.29□□□□□ -0.44
NUP50-216ENST00000486184 FAM161BQ96MY7 647 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 BPIFA3Q9BQP9 254 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
NUP50-216ENST00000486184 AGAP1Q9UPQ3 857 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUP50-216ENST00000486184 PTPRJQ12913 1337 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
NUP50-216ENST00000486184 TSC2P49815 1807 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 ARHGEF37A1IGU5 675 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 TMEM189-UBE2V1I3L0A0 370 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 N4BP1O75113 896 aaKnown RBP12.28□□□□□ -0.44
NUP50-216ENST00000486184 CSPG5O95196 566 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 ITGB1P05556 798 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
NUP50-216ENST00000486184 PAX3P23760 479 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 GTF2H1P32780 548 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 PIK3CAP42336 1068 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 TAF6P49848 677 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 MXI1P50539 228 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 PLCB3Q01970 1234 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 CETN1Q12798 172 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 SV2CQ496J9 727 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 KIAA1841Q6NSI8 718 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 FUT10Q6P4F1 479 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 DSTYKQ6XUX3 929 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 TRAPPC11Q7Z392 1133 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 DDX53Q86TM3 631 aaKnown RBP12.28□□□□□ -0.44
NUP50-216ENST00000486184 C1orf127Q8N9H9 656 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 CCDC150Q8NCX0 1101 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 PLEKHO2Q8TD55 490 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 GAS2L1Q99501 681 aaPredicted RBP12.28□□□□□ -0.44
NUP50-216ENST00000486184 ANP32EQ9BTT0 268 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 LMAN2LQ9H0V9 348 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 TTYH1Q9H313 450 aaPredicted RBP12.28□□□□□ -0.44
NUP50-216ENST00000486184 TSPY26PQ9H489 355 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 PRDM12Q9H4Q4 367 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 ENTPD7Q9NQZ7 604 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 LZTS1Q9Y250 596 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 VWA8A3KMH1 1905 aa12.28□□□□□ -0.44
NUP50-216ENST00000486184 KCNJ18B7U540 433 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 GOLGA6L19H0YKK7 550 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.45
NUP50-216ENST00000486184 URODP06132 367 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 PYGBP11216 843 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 PRKCSHP14314 528 aaPredicted RBP12.27□□□□□ -0.45
NUP50-216ENST00000486184 CDK11BP21127 795 aaKnown RBP12.27□□□□□ -0.45
NUP50-216ENST00000486184 EEF1GP26641 437 aaKnown RBP12.27□□□□□ -0.45
NUP50-216ENST00000486184 GCLMP48507 274 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 MARSP56192 900 aaKnown RBP12.27□□□□□ -0.45
NUP50-216ENST00000486184 CLDN10P78369 228 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 KCNJ12Q14500 433 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 KRT39Q6A163 491 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 TMC7Q7Z402 723 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 TMEM173Q86WV6 379 aaPredicted RBP12.27□□□□□ -0.45
NUP50-216ENST00000486184 CEP57Q86XR8 500 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 VPS52Q8N1B4 723 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 LRRC52Q8N7C0 313 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 MICAL1Q8TDZ2 1067 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 POF1BQ8WVV4 589 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 FAM84AQ96KN4 292 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 MED15Q96RN5 788 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 TMEM8AQ9HCN3 771 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 TLR9Q9NR96 1032 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
NUP50-216ENST00000486184 ANO9A1A5B4 782 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 F8W810 466 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 PIRO00625 290 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 PPEF2O14830 753 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 GRM6O15303 877 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 AFPP02771 609 aaKnown RBP12.26□□□□□ -0.45
NUP50-216ENST00000486184 SOD2P04179 222 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 ODC1P11926 461 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 BRCC3P46736 316 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 GLUD2P49448 558 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 FXR1P51114 621 aaKnown RBP eCLIP12.26□□□□□ -0.45
NUP50-216ENST00000486184 MYL7Q01449 175 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 PPP3CAQ08209 521 aa12.26□□□□□ -0.45
NUP50-216ENST00000486184 NCOA4Q13772 614 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms