RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 LILRB3O75022 631 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 AKAP3O75969 853 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 TNNC2P02585 160 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 DLATP10515 647 aaKnown RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 TNNI1P19237 187 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 PTMSP20962 102 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 FGFR3P22607 806 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 IGFBP6P24592 240 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 PSMC2P35998 433 aaKnown RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 PNPLA4P41247 253 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 BRCC3P46736 316 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 NRIP1P48552 1158 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 CASP4P49662 377 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 AP3M2P53677 418 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 CREMQ03060 361 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 ENPEPQ07075 957 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 HYAL1Q12794 435 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 SKIV2LQ15477 1246 aaKnown RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 RTP2Q5QGT7 225 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 ANKRD40Q6AI12 368 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 INTS8Q75QN2 995 aaKnown RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 C1orf127Q8N9H9 656 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 PARD3BQ8TEW8 1205 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 CGRRF1Q99675 332 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 EMILIN2Q9BXX0 1053 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 MTMR12Q9C0I1 747 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 COG5Q9UP83 839 aa11.7□□□□□ -0.54
ATG4B-219ENST00000479941 R3HCC1Q9Y3T6 440 aaKnown RBP11.7□□□□□ -0.54
ATG4B-219ENST00000479941 A0A0C4DFX4 3053 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 BRWD1Q9NSI6 2320 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 ARHGEF37A1IGU5 675 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 M0QZQ0 153 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 C2CD2LO14523 706 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PPEF2O14830 753 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PER2O15055 1255 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 SLC16A3O15427 465 aaKnown RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 ITGB3P05106 788 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 AARSP49588 968 aaKnown RBP eCLIP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 TAF6P49848 677 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PMS1P54277 932 aaKnown RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 LILRA4P59901 499 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 CLDN10P78369 228 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 RBP5P82980 135 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PAK1Q13153 545 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 COL19A1Q14993 1142 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 DUSP6Q16828 381 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 LMBRD2Q68DH5 695 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 KLHL10Q6JEL2 608 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 RBM43Q6ZSC3 357 aaKnown RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 RBM23Q86U06 439 aaKnown RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PPFIBP1Q86W92 1011 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 CEP57Q86XR8 500 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 ZC3H3Q8IXZ2 948 aaKnown RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 FAM186BQ8IYM0 893 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 LRRC52Q8N7C0 313 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 EFHBQ8N7U6 833 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 APPL2Q8NEU8 664 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 OR5B17Q8NGF7 314 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 LNX1Q8TBB1 728 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 NELFBQ8WX92 580 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 AUTS2Q8WXX7 1259 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 RIN2Q8WYP3 895 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PIK3R5Q8WYR1 880 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PABPC5Q96DU9 382 aaKnown RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 SUSD3Q96L08 255 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 B3GALT6Q96L58 329 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 ZNF560Q96MR9 790 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 POP1Q99575 1024 aaKnown RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 GZF1Q9H116 711 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-219ENST00000479941 IGFLR1Q9H665 355 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 RXFP1Q9HBX9 757 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 FNIP2Q9P278 1114 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 AGAP1Q9UPQ3 857 aa11.69□□□□□ -0.54
ATG4B-219ENST00000479941 PTPRJQ12913 1337 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 TRIM49BA6NDI0 452 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 LRRIQ3A6PVS8 624 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-219ENST00000479941 IKBKBO14920 756 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
ATG4B-219ENST00000479941 C1RP00736 705 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 ADH1AP07327 375 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 KRT19P08727 400 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
ATG4B-219ENST00000479941 SRGAP2BP0DMP2 458 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 EPB41P11171 864 aaKnown RBP11.68□□□□□ -0.54
ATG4B-219ENST00000479941 KRT13P13646 458 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 TKTP29401 623 aaKnown RBP11.68□□□□□ -0.54
ATG4B-219ENST00000479941 POLR2BP30876 1174 aaKnown RBP11.68□□□□□ -0.54
ATG4B-219ENST00000479941 NLRP12P59046 1061 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 MCCD1P59942 119 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-219ENST00000479941 ADAM15Q13444 863 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 PSMD5Q16401 504 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 CTC1Q2NKJ3 1217 aa11.68□□□□□ -0.54
ATG4B-219ENST00000479941 SV2CQ496J9 727 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms