RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 ZSCAN30Q86W11 494 aa4.84□□□□□ -1.63
CMSS1-204ENST00000479555 SRRM1Q8IYB3 904 aaKnown RBP4.84□□□□□ -1.63
CMSS1-204ENST00000479555 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.84□□□□□ -1.63
CMSS1-204ENST00000479555 NELL1Q92832 810 aa4.84□□□□□ -1.63
CMSS1-204ENST00000479555 SLC5A5Q92911 643 aa4.84□□□□□ -1.63
CMSS1-204ENST00000479555 FUBP3Q96I24 572 aaKnown RBP eCLIP4.84□□□□□ -1.63
CMSS1-204ENST00000479555 PUS7LQ9H0K6 701 aaKnown RBP4.84□□□□□ -1.63
CMSS1-204ENST00000479555 SEMA4GQ9NTN9 838 aa4.84□□□□□ -1.63
CMSS1-204ENST00000479555 SIK3Q9Y2K2 1263 aa4.84□□□□□ -1.63
CMSS1-204ENST00000479555 NOX1Q9Y5S8 564 aa4.84□□□□□ -1.63
CMSS1-204ENST00000479555 WDR97A6NE52 1622 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 ERICH3Q5RHP9 1530 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 ZMYM4Q5VZL5 1548 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 COL3A1P02461 1466 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 RAB3GAP2Q9H2M9 1393 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 AKR1B10O60218 316 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 GASTP01350 101 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 RAP2AP10114 183 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 ALOX15P16050 662 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 CALRP27797 417 aaKnown RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 CRHR1P34998 444 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 PROK1P58294 105 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 MRPS35P82673 323 aaKnown RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 SPDYE7PQ495Y7 208 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 AFMIDQ63HM1 303 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 PDCL2Q8N4E4 241 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 ACTRT2Q8TDY3 377 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 RIN2Q8WYP3 895 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 AIFM2Q9BRQ8 373 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 MRI1Q9BV20 369 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 TOPORSQ9NS56 1045 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 DDX56Q9NY93 547 aaKnown RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 KCNG1Q9UIX4 513 aa4.83□□□□□ -1.64
CMSS1-204ENST00000479555 NOC2LQ9Y3T9 749 aaKnown RBP4.83□□□□□ -1.64
CMSS1-204ENST00000479555 PLEKHH2Q8IVE3 1493 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 ROCK2O75116 1388 aaKnown RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 EIF3AQ14152 1382 aaKnown RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 IBTKQ9P2D0 1353 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 RPTORQ8N122 1335 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 PJA2O43164 708 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 FRAT2O75474 233 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 ZFPL1O95159 310 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 CDKN1CP49918 316 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 EXOSC10Q01780 885 aaKnown RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 RRP12Q5JTH9 1297 aaKnown RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 SH2D3CQ8N5H7 860 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 RSAD2Q8WXG1 361 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 MYOCQ99972 504 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 FAM126AQ9BYI3 521 aaPredicted RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 SLC29A3Q9BZD2 475 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 WNT8AQ9H1J5 351 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 GRPEL1Q9HAV7 217 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 TBCCD1Q9NVR7 557 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 FBXO34Q9NWN3 711 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 LRIT1Q9P2V4 623 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 KIF3AQ9Y496 699 aa4.82□□□□□ -1.64
CMSS1-204ENST00000479555 TOP2AP11388 1531 aaKnown RBP4.82□□□□□ -1.64
CMSS1-204ENST00000479555 MAPK8IP3Q9UPT6 1336 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 CGB1A6NKQ9 187 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 SNRPA1P09661 255 aaKnown RBP4.81□□□□□ -1.64
CMSS1-204ENST00000479555 ITGB6P18564 788 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 FPR1P21462 350 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 ALDH1A3P47895 512 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 ID4P47928 161 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 RRP1P56182 461 aaKnown RBP4.81□□□□□ -1.64
CMSS1-204ENST00000479555 ITKQ08881 620 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 FAM50AQ14320 339 aaKnown RBP4.81□□□□□ -1.64
CMSS1-204ENST00000479555 UGT8Q16880 541 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 SASS6Q6UVJ0 657 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 RASSF3Q86WH2 238 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 CMIPQ8IY22 773 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 SLC9A6Q92581 669 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 PDLIM2Q96JY6 352 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 PRKRIP1Q9H875 184 aaPredicted RBP4.81□□□□□ -1.64
CMSS1-204ENST00000479555 DMRT3Q9NQL9 472 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 CALCOCO1Q9P1Z2 691 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 ABCA5Q8WWZ7 1642 aa4.81□□□□□ -1.64
CMSS1-204ENST00000479555 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 GPANK1O95872 356 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 PDGFRBP09619 1106 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 XRCC6P12956 609 aaKnown RBP eCLIP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 MCCP23508 829 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 CACNA2D1P54289 1103 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 NHLH1Q02575 133 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 GABPB1Q06547 395 aaPredicted RBP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 CYP2A13Q16696 494 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 GEN1Q17RS7 908 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 UBE3BQ7Z3V4 1068 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 OR7D4Q8NG98 312 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 SCARB1Q8WTV0 552 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 TSPEARQ8WU66 669 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 TGFBRAP1Q8WUH2 860 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 DDB2Q92466 427 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 PTCD3Q96EY7 689 aaKnown RBP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 AHCYL2Q96HN2 611 aaKnown RBP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 ZNF778Q96MU6 729 aa4.8□□□□□ -1.64
CMSS1-204ENST00000479555 UHRF1Q96T88 793 aaPredicted RBP4.8□□□□□ -1.64
CMSS1-204ENST00000479555 CHMP4BQ9H444 224 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 754.7 ms