RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 EFCAB12Q6NXP0 572 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 INO80CQ6PI98 192 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-206ENST00000471968 DHX40Q8IX18 779 aaKnown RBP7.44□□□□□ -1.22
HDAC3-206ENST00000471968 MMP21Q8N119 569 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 HASPINQ8TF76 798 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 KCNE4Q8WWG9 221 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 APPBP2Q92624 585 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 MOCOSQ96EN8 888 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 ARHGAP9Q9BRR9 750 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 EPN3Q9H201 632 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 TMPRSS4Q9NRS4 437 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 EXOC6BQ9Y2D4 811 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 FNDC3AQ9Y2H6 1198 aaKnown RBP7.44□□□□□ -1.22
HDAC3-206ENST00000471968 SF3B1O75533 1304 aaKnown RBP eCLIP7.44□□□□□ -1.22
HDAC3-206ENST00000471968 CNTNAP2Q9UHC6 1331 aa7.44□□□□□ -1.22
HDAC3-206ENST00000471968 PALM3A6NDB9 673 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-206ENST00000471968 PRRG1O14668 218 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 CILPO75339 1184 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 ALDH1A2O94788 518 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 IFIT2P09913 472 aaKnown RBP7.43□□□□□ -1.22
HDAC3-206ENST00000471968 ITGB5P18084 799 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 SFPQP23246 707 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDAC3-206ENST00000471968 TMOD1P28289 359 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 SCNN1GP51170 649 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 PLCB2Q00722 1185 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 SPIRE1Q08AE8 756 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 LINC00303Q3SY05 128 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 ARID3BQ8IVW6 561 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-206ENST00000471968 CKAP2LQ8IYA6 745 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 RGL4Q8IZJ4 473 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 SPATA20Q8TB22 786 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 EZH1Q92800 747 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-206ENST00000471968 P2RY13Q9BPV8 354 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 ZDHHC5Q9C0B5 715 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 GAREM1Q9H706 876 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 C1orf115Q9H7X2 142 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 GMIPQ9P107 970 aa7.43□□□□□ -1.22
HDAC3-206ENST00000471968 BCCIPQ9P287 314 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDAC3-206ENST00000471968 ARHGEF37A1IGU5 675 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 VPS37CA5D8V6 355 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-206ENST00000471968 ARL5CA6NH57 179 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 OTOL1A6NHN0 477 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-206ENST00000471968 ORC4O43929 436 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 AGFG2O95081 481 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 FAM87AP0C7U9 286 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 ZNF883P0CG24 379 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 MLH1P40692 756 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 BYSLQ13895 437 aaKnown RBP7.42□□□□□ -1.22
HDAC3-206ENST00000471968 NCAPHQ15003 741 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 CRY1Q16526 586 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 ASPRV1Q53RT3 343 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 STXBP5Q5T5C0 1151 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 HES3Q5TGS1 186 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 IQCEQ6IPM2 695 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-206ENST00000471968 DBX2Q6ZNG2 339 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 MRPL10Q7Z7H8 261 aaKnown RBP7.42□□□□□ -1.22
HDAC3-206ENST00000471968 POTEDQ86YR6 584 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 ERC1Q8IUD2 1116 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 CCDC33Q8N5R6 958 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 TTC14Q96N46 770 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 GCOM2Q9BZD3 368 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-206ENST00000471968 GPR88Q9GZN0 384 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 MIOSQ9NXC5 875 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 CACNG4Q9UBN1 327 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 CDY1Q9Y6F8 540 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 MYH6P13533 1939 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 SVILO95425 2214 aa7.42□□□□□ -1.22
HDAC3-206ENST00000471968 ZBTB5O15062 677 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 MAGEB2O15479 319 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 LUC7L3O95232 432 aaKnown RBP7.41□□□□□ -1.22
HDAC3-206ENST00000471968 CER1O95813 267 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 HNRNPLP14866 589 aaKnown RBP eCLIP7.41□□□□□ -1.22
HDAC3-206ENST00000471968 GNSP15586 552 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 ATP5JP18859 108 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 ELF1P32519 619 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 SEC13P55735 322 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 AMPD2Q01433 879 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 SCRN1Q12765 414 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 RUNX3Q13761 415 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 SKIDA1Q1XH10 827 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 FAM160B1Q5W0V3 765 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 TRIM68Q6AZZ1 485 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 CATSPER4Q7RTX7 472 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 HOMER1Q86YM7 354 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 SLC41A1Q8IVJ1 513 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 CCDC60Q8IWA6 550 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-206ENST00000471968 CLASRPQ8N2M8 674 aaKnown RBP7.41□□□□□ -1.22
HDAC3-206ENST00000471968 PGBD3Q8N328 593 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 ELMOD1Q8N336 334 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 LINC01465Q8N7H1 131 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 TRIML1Q8N9V2 468 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 ENGASEQ8NFI3 743 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 SHKBP1Q8TBC3 707 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 BPIFB1Q8TDL5 484 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 HMGB4Q8WW32 186 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 ZFP42Q96MM3 310 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 HSPA12BQ96MM6 686 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 SDF4Q9BRK5 362 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 DPH1Q9BZG8 443 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms