RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PRG3Q9Y2Y8 225 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 PTPRJQ12913 1337 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 ANO9A1A5B4 782 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 NT5C1B-RDH14C9J2C7 533 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 PODXLO00592 558 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 EPB41P11171 864 aaKnown RBP16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 PAX3P23760 479 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 AP3M2P53677 418 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 KRT17Q04695 432 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 BFSP1Q12934 665 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 GPM6BQ13491 265 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 DCLRE1AQ6PJP8 1040 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 SPPL3Q8TCT6 385 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 PLEKHO2Q8TD55 490 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 CCDC127Q96BQ5 260 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 MED15Q96RN5 788 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 MTMR12Q9C0I1 747 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 ADAM28Q9UKQ2 775 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 ITGA11Q9UKX5 1188 aa16.15■□□□□ 0.18
CDC42SE1-203ENST00000470278 SF3B1O75533 1304 aaKnown RBP eCLIP16.15■□□□□ 0.189e-7■■■■■ 35.8
CDC42SE1-203ENST00000470278 LRRIQ3A6PVS8 624 aaPredicted RBP16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 F8W810 466 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 PIRO00625 290 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 IKBKBO14920 756 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 B3GAT3O94766 335 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 GNA14O95837 355 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 TMEM191BP0C7N4 346 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 DLATP10515 647 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 MARSP56192 900 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 STX17P56962 302 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 TFAMQ00059 246 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 TYRO3Q06418 890 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 DUOXA2Q1HG44 320 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 C9orf57Q5W0N0 161 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 FILIP1Q7Z7B0 1213 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 DDX53Q86TM3 631 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 C1orf127Q8N9H9 656 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 C3orf58Q8NDZ4 430 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 CXorf38Q8TB03 319 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 ANKRD36BP1Q96IX9 119 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 C1QTNF1Q9BXJ1 281 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 DPP3Q9NY33 737 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 CACNG4Q9UBN1 327 aa16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 PUF60Q9UHX1 559 aaKnown RBP16.14■□□□□ 0.17
CDC42SE1-203ENST00000470278 FAM86C2PA6NEL3 165 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 GRM6O15303 877 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 FGFR1OPO95684 399 aaKnown RBP16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 TNNC2P02585 160 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 KRT13P13646 458 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 IL9P15248 144 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 TNNI1P19237 187 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 VAMP7P51809 220 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 GUCY2FP51841 1108 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 ELAVL2Q12926 359 aaKnown RBP16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 CAMK1Q14012 370 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 PTPROQ16827 1216 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 LEXMQ3ZCV2 418 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 FUT10Q6P4F1 479 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 CD300LGQ6UXG3 332 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 FRMD5Q7Z6J6 570 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 LRRC52Q8N7C0 313 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 OR5B17Q8NGF7 314 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 POF1BQ8WVV4 589 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 EEF2KMTQ96G04 330 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 FUCA2Q9BTY2 467 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 HERC2P3Q9BVR0 1158 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 VN1R3Q9BXE9 311 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 METTL14Q9HCE5 456 aaKnown RBP16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 ALG13Q9NP73 1137 aaKnown RBP16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
CDC42SE1-203ENST00000470278 TSC2P49815 1807 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 TECTAO75443 2155 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 FSCN2O14926 492 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 TADA2AO75478 443 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 SOD2P04179 222 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 CCDC192P0DO97 292 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 DNAJB1P25685 340 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 GTF2H1P32780 548 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 PNPLA4P41247 253 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 C1orf220Q5T0J3 134 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 PDE12Q6L8Q7 609 aaKnown RBP16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 C11orf57Q6ZUT1 292 aaPredicted RBP16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 GPR65Q8IYL9 337 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 MRPL38Q96DV4 380 aaKnown RBP16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 ZBP1Q9H171 429 aa16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 ARMCX3Q9UH62 379 aaPredicted RBP16.12■□□□□ 0.17
CDC42SE1-203ENST00000470278 VWA8A3KMH1 1905 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 SCN1AP35498 2009 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 SYCE3A1L190 88 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 TRAPPC3O43617 180 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 ITGB3P05106 788 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 KCNA5P22460 613 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 DLG4P78352 724 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 ZSCAN23Q3MJ62 389 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 ZACNQ401N2 412 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 LMBRD2Q68DH5 695 aaPredicted RBP16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 C15orf39Q6ZRI6 1047 aa16.11■□□□□ 0.17
CDC42SE1-203ENST00000470278 TRAPPC11Q7Z392 1133 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms