RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
MECP2-206ENST00000460227 SYCE3A1L190 88 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 PPEF2O14830 753 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 CCDC192P0DO97 292 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 KRT13P13646 458 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 PAX3P23760 479 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 MARSP56192 900 aaKnown RBP13.87□□□□□ -0.19
MECP2-206ENST00000460227 LILRA4P59901 499 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 RBP5P82980 135 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 BFSP1Q12934 665 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 C15orf39Q6ZRI6 1047 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 C11orf57Q6ZUT1 292 aaPredicted RBP13.87□□□□□ -0.19
MECP2-206ENST00000460227 USP37Q86T82 979 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 ANKRD36BP1Q96IX9 119 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 FAM84AQ96KN4 292 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 MTMR12Q9C0I1 747 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 CHST7Q9NS84 486 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 ARMCX3Q9UH62 379 aaPredicted RBP13.87□□□□□ -0.19
MECP2-206ENST00000460227 ITGA11Q9UKX5 1188 aa13.87□□□□□ -0.19
MECP2-206ENST00000460227 FSCN2O14926 492 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 LILRB3O75022 631 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 TNNC2P02585 160 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 SOD2P04179 222 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 TMEM191BP0C7N4 346 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 GTF2H1P32780 548 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.19
MECP2-206ENST00000460227 ERVFC1P60507 584 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 PPP3CAQ08209 521 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 TIGD5Q53EQ6 642 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 SV2AQ7L0J3 742 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 GDPD5Q8WTR4 605 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 CDX2Q99626 313 aaPredicted RBP13.86□□□□□ -0.19
MECP2-206ENST00000460227 DNAJC25Q9H1X3 360 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 THAP9Q9H5L6 903 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 AGAP1Q9UPQ3 857 aa13.86□□□□□ -0.19
MECP2-206ENST00000460227 FNDC1Q4ZHG4 1894 aaPredicted RBP13.86□□□□□ -0.19
MECP2-206ENST00000460227 SPTLC1O15269 473 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 TRAPPC3O43617 180 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 ITGB3P05106 788 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 CTSAP10619 480 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 BRCC3P46736 316 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 ELAVL2Q12926 359 aaKnown RBP13.85□□□□□ -0.19
MECP2-206ENST00000460227 ZACNQ401N2 412 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 ANO6Q4KMQ2 910 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 TDRD10Q5VZ19 366 aaKnown RBP13.85□□□□□ -0.19
MECP2-206ENST00000460227 PDE12Q6L8Q7 609 aaKnown RBP13.85□□□□□ -0.19
MECP2-206ENST00000460227 TRIM59Q8IWR1 403 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 LRRC52Q8N7C0 313 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 MRPL43Q8N983 215 aaKnown RBP13.85□□□□□ -0.19
MECP2-206ENST00000460227 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 MRPL38Q96DV4 380 aaKnown RBP13.85□□□□□ -0.19
MECP2-206ENST00000460227 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 GUCD1Q96NT3 240 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 BPIFA3Q9BQP9 254 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 ZBP1Q9H171 429 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 NGRNQ9NPE2 291 aaKnown RBP13.85□□□□□ -0.19
MECP2-206ENST00000460227 MTCH2Q9Y6C9 303 aa13.85□□□□□ -0.19
MECP2-206ENST00000460227 M0QZQ0 153 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 STX10O60499 249 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 VNN1O95497 513 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 CXCL14O95715 111 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 TRIM49P0CI25 452 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 TRIM49CP0CI26 452 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 FGFR3P22607 806 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 POLR2BP30876 1174 aaKnown RBP13.84□□□□□ -0.19
MECP2-206ENST00000460227 IRS1P35568 1242 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 PNPLA4P41247 253 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 GCLMP48507 274 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 DSG1Q02413 1049 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 MRPL58Q14197 206 aaKnown RBP13.84□□□□□ -0.19
MECP2-206ENST00000460227 NCAPHQ15003 741 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 PTPROQ16827 1216 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 TPD52L1Q16890 204 aaPredicted RBP13.84□□□□□ -0.19
MECP2-206ENST00000460227 USP41Q3LFD5 358 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 CCDC40Q4G0X9 1142 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 FAM171A1Q5VUB5 890 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 TMC7Q7Z402 723 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 SLC35C1Q96A29 364 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 HERC2P3Q9BVR0 1158 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 TMEM8AQ9HCN3 771 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 TLR9Q9NR96 1032 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 SAMSN1Q9NSI8 373 aaKnown RBP13.84□□□□□ -0.19
MECP2-206ENST00000460227 NFE2L3Q9Y4A8 694 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 NUB1Q9Y5A7 615 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 IRAK3Q9Y616 596 aa13.84□□□□□ -0.19
MECP2-206ENST00000460227 SF3B1O75533 1304 aaKnown RBP eCLIP13.84□□□□□ -0.19
MECP2-206ENST00000460227 KPNA7A9QM74 516 aa13.83□□□□□ -0.2
MECP2-206ENST00000460227 PMM2O15305 246 aa13.83□□□□□ -0.2
MECP2-206ENST00000460227 STAU1O95793 577 aaKnown RBP13.83□□□□□ -0.2
MECP2-206ENST00000460227 KRT19P08727 400 aa13.83□□□□□ -0.2
MECP2-206ENST00000460227 ATICP31939 592 aa13.83□□□□□ -0.2
MECP2-206ENST00000460227 TAF6P49848 677 aa13.83□□□□□ -0.2
MECP2-206ENST00000460227 KRT39Q6A163 491 aa13.83□□□□□ -0.2
MECP2-206ENST00000460227 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.83□□□□□ -0.2
MECP2-206ENST00000460227 LIMS2Q7Z4I7 341 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms