RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 PRG3Q9Y2Y8 225 aaPredicted RBP13.41□□□□□ -0.26
GTF3C2-208ENST00000457748 PCDHB12Q9Y5F1 795 aa13.41□□□□□ -0.26
GTF3C2-208ENST00000457748 FNDC1Q4ZHG4 1894 aaPredicted RBP13.41□□□□□ -0.26
GTF3C2-208ENST00000457748 A0A1B0GTH6 734 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 GTPBP10A4D1E9 387 aaKnown RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 TADA2AO75478 443 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 B3GAT3O94766 335 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 PAX3P23760 479 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 TAF6P49848 677 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 BCAR1P56945 870 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 TNNC1P63316 161 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 DSC1Q08554 894 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 GSE1Q14687 1217 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 NAB2Q15742 525 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 RAB30Q15771 203 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 UPP1Q16831 310 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 C15orf39Q6ZRI6 1047 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 LRRC52Q8N7C0 313 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 EHBP1Q8NDI1 1231 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 TAS1R2Q8TE23 839 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 ANP32BQ92688 251 aaKnown RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 TAF4BQ92750 862 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 NAP1L5Q96NT1 182 aaPredicted RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 INTS2Q9H0H0 1204 aaKnown RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 RC3H2Q9HBD1 1191 aaKnown RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.4□□□□□ -0.264e-7■■■■■ 102.6
GTF3C2-208ENST00000457748 DNAJB4Q9UDY4 337 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 SIX4Q9UIU6 781 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 RWDD3Q9Y3V2 267 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
GTF3C2-208ENST00000457748 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 GRXCR1A8MXD5 290 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 PIRO00625 290 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 NRP1O14786 923 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 VNN1O95497 513 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 GALTP07902 379 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 PPM1AP35813 382 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 SLC11A1P49279 550 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 MYL6P60660 151 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 ZNF667Q5HYK9 610 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 KCNT2Q6UVM3 1135 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 APTXQ7Z2E3 356 aaKnown RBP13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 NT5C1BQ96P26 610 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 XPO4Q9C0E2 1151 aaKnown RBP13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 CWH43Q9H720 699 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 CACNG4Q9UBN1 327 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 COQ4Q9Y3A0 265 aa13.39□□□□□ -0.27
GTF3C2-208ENST00000457748 KPNA7A9QM74 516 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 CST3P01034 146 aaPredicted RBP13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 MRE11P49959 708 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 NOP14P78316 857 aaKnown RBP13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 LRMPQ12912 555 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 NR1I3Q14994 352 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 SYCP1Q15431 976 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 WDR72Q3MJ13 1102 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 EPC2Q52LR7 807 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 COLGALT1Q8NBJ5 622 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 HASPINQ8TF76 798 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 TMEM169Q96HH4 297 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 PAAF1Q9BRP4 392 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 PI4K2AQ9BTU6 479 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 LSM14BQ9BX40 385 aaKnown RBP13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 HCSTQ9UBK5 93 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 NXF1Q9UBU9 619 aaKnown RBP13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 ADAM28Q9UKQ2 775 aa13.38□□□□□ -0.27
GTF3C2-208ENST00000457748 A0A1W2PQC6 194 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 NT5C1B-RDH14C9J2C7 533 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 PPEF2O14830 753 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 TEX33O43247 280 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 B4GALT3O60512 393 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 HUS1O60921 280 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 KIF4AO95239 1232 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 STAU1O95793 577 aaKnown RBP13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 ASS1P00966 412 aaKnown RBP13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 CA3P07451 260 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 TPM1P09493 284 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 MYOGP15173 224 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 PON1P27169 355 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 CTNNB1P35222 781 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 PBX3P40426 434 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 LILRA4P59901 499 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 KRT17Q04695 432 aa13.37□□□□□ -0.27
GTF3C2-208ENST00000457748 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms