RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PRAMEF4O60810 478 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 ESRRBO95718 433 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 MANFP55145 182 aaKnown RBP6.28□□□□□ -1.4
LINC00458-202ENST00000427299 TRIM25Q14258 630 aaKnown RBP6.28□□□□□ -1.4
LINC00458-202ENST00000427299 ABHD15Q6UXT9 468 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 TFAP2CQ92754 450 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 CEP95Q96GE4 821 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 PRDM12Q9H4Q4 367 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 POGKQ9P215 609 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 MAP3K2Q9Y2U5 619 aa6.28□□□□□ -1.4
LINC00458-202ENST00000427299 USP15Q9Y4E8 981 aaPredicted RBP6.28□□□□□ -1.4
LINC00458-202ENST00000427299 SHPRHQ149N8 1683 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 PTPRTO14522 1441 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 ZEB2O60315 1214 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 LSP1P33241 339 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 PLA2G5P39877 138 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 MPLP40238 635 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 SCAPQ12770 1279 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 STRN3Q13033 797 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 RESTQ13127 1097 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 CT47A1Q5JQC4 288 aaPredicted RBP6.27□□□□□ -1.41
LINC00458-202ENST00000427299 LHFPL2Q6ZUX7 228 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.27□□□□□ -1.41
LINC00458-202ENST00000427299 BOLLQ8N9W6 283 aaKnown RBP6.27□□□□□ -1.41
LINC00458-202ENST00000427299 OR14C36Q8NHC7 312 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 MDM1Q8TC05 714 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 SNX33Q8WV41 574 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 NELL1Q92832 810 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 LRFN3Q9BTN0 628 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 RSAD1Q9HA92 442 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 SPTLC3Q9NUV7 552 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 GPRC5DQ9NZD1 345 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 MCM8Q9UJA3 840 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 DISP3Q9P2K9 1392 aa6.27□□□□□ -1.41
LINC00458-202ENST00000427299 ARHGEF28Q8N1W1 1705 aaKnown RBP6.27□□□□□ -1.41
LINC00458-202ENST00000427299 MAST3O60307 1309 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 KIDINS220Q9ULH0 1771 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 CAMSAP1Q5T5Y3 1602 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 BRINP1O60477 761 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 GASTP01350 101 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 CFIP05156 583 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 CDK4P11802 303 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 SCNN1BP51168 640 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 MPP3Q13368 585 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 DDB1Q16531 1140 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 MFSD14BQ5SR56 506 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 AGAP9Q5VTM2 703 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 ARMC6Q6NXE6 501 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 NGEFQ8N5V2 710 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 OR2W6PQ8NHA6 318 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 SLC9A6Q92581 669 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 FRMPD1Q5SYB0 1578 aa6.26□□□□□ -1.41
LINC00458-202ENST00000427299 KIF20BQ96Q89 1820 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 ALG1L2C9J202 215 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 NEMP1O14524 444 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 GPR39O43194 453 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 PDGFRBP09619 1106 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 CPEP16870 476 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 CTSSP25774 331 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 ADCYAP1R1P41586 468 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 ELLP55199 621 aaPredicted RBP6.25□□□□□ -1.41
LINC00458-202ENST00000427299 EVA1CP58658 441 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 STAT4Q14765 748 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 FRMD7Q6ZUT3 714 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 NOL8Q76FK4 1167 aaKnown RBP6.25□□□□□ -1.41
LINC00458-202ENST00000427299 ZFP28Q8NHY6 868 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 GPR101Q96P66 508 aaPredicted RBP6.25□□□□□ -1.41
LINC00458-202ENST00000427299 ANO3Q9BYT9 981 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 IFT22Q9H7X7 185 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 METTL14Q9HCE5 456 aaKnown RBP6.25□□□□□ -1.41
LINC00458-202ENST00000427299 CDY2AQ9Y6F7 541 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 FANCAO15360 1455 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 ERCC6L2Q5T890 1561 aa6.25□□□□□ -1.41
LINC00458-202ENST00000427299 CLTCQ00610 1675 aaKnown RBP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 ADGRL1O94910 1474 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 NKTRP30414 1462 aaKnown RBP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 ZNF518AQ6AHZ1 1483 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 NRXN1Q9ULB1 1477 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 KDM1AO60341 852 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 CDKL5O76039 1030 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 ITGAMP11215 1152 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 ID4P47928 161 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 LSSP48449 732 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 HNRNPMP52272 730 aaKnown RBP eCLIP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 CHN2P52757 468 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 OCRLQ01968 901 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 WDR43Q15061 677 aaKnown RBP eCLIP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 PLEKHG6Q3KR16 790 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 PITRM1Q5JRX3 1037 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 PRAMEF14Q5SWL7 426 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 ZNF362Q5T0B9 420 aaPredicted RBP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 RNF219Q5W0B1 726 aaPredicted RBP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 PAPD7Q5XG87 772 aaKnown RBP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 NECAB2Q7Z6G3 386 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 SLC44A3Q8N4M1 653 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 TTC1Q99614 292 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.24□□□□□ -1.41
LINC00458-202ENST00000427299 HOMER2Q9NSB8 354 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 RNF181Q9P0P0 153 aa6.24□□□□□ -1.41
LINC00458-202ENST00000427299 KLHL42Q9P2K6 505 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms