RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 CERS3Q8IU89 383 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 KBTBD3Q8NAB2 608 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 SLC7A14Q8TBB6 771 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 ZKSCAN4Q969J2 545 aaPredicted RBP5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 WNK4Q96J92 1243 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 IPPKQ9H8X2 491 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 FANCLQ9NW38 375 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 STAP2Q9UGK3 403 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 SAP30BPQ9UHR5 308 aaKnown RBP5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 ZNF112Q9UJU3 913 aa5.68□□□□□ -1.5
ATG4AP1-201ENST00000416893 ARVCFO00192 962 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 DDX3XO00571 662 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 WNT9AO14904 365 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 CYP1A1P04798 512 aaPredicted RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 COL6A2P12110 1019 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 FAHP16930 419 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 SLC4A8Q2Y0W8 1093 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 ZSCAN25Q6NSZ9 544 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 TMC5Q6UXY8 1006 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 EP400NLQ6ZTU2 488 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 C16orf86Q6ZW13 317 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 ERO1BQ86YB8 467 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 NLGN4XQ8N0W4 816 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 LCORLQ8N3X6 602 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 TXNDC5Q8NBS9 432 aaKnown RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 CHST13Q8NET6 341 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 CLEC4DQ8WXI8 215 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 FBXW5Q969U6 566 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 OPTNQ96CV9 577 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 LCORQ96JN0 433 aaPredicted RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 ZSWIM3Q96MP5 696 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 FSD1Q9BTV5 496 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 SSBP3Q9BWW4 388 aaPredicted RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 CRNKL1Q9BZJ0 848 aaKnown RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 PUS7LQ9H0K6 701 aaKnown RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 DHX36Q9H2U1 1008 aaKnown RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 DNAJC18Q9H819 358 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 ARMT1Q9H993 441 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 TRIM39Q9HCM9 518 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 RRAGDQ9NQL2 400 aaPredicted RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 DLL4Q9NR61 685 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 GEMIN8Q9NWZ8 242 aaKnown RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 SFMBT1Q9UHJ3 866 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 HERC5Q9UII4 1024 aaKnown RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 KCNG1Q9UIX4 513 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 TRIOBPQ9H2D6 2365 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 ZNF536O15090 1300 aa5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 TNRC18O15417 2968 aaPredicted RBP5.67□□□□□ -1.5
ATG4AP1-201ENST00000416893 LAMA3Q16787 3333 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 BAZ2BQ9UIF8 2168 aaKnown RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 PPP1R12AO14974 1030 aaPredicted RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 NKRFO15226 690 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 RNF113AO15541 343 aaKnown RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CA12O43570 354 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 PRKAB2O43741 272 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CDC45O75419 566 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 RFPL3O75679 317 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 ASMTLO95671 621 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CRTAMO95727 393 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 HLA-DOAP06340 250 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 ZFYP08048 801 aaPredicted RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 HSPA8P11142 646 aaKnown RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 ZNF28P17035 718 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CTCFP49711 727 aaPredicted RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 EPHA5P54756 1037 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 GRIN1Q05586 938 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 SREBF2Q12772 1141 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 PPIL2Q13356 520 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 TCEA2Q15560 299 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 PAN2Q504Q3 1202 aaKnown RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 FAM47CQ5HY64 1035 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 SCYL3Q8IZE3 742 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 SDR42E1Q8WUS8 393 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 BRI3BPQ8WY22 251 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 TMEM168Q9H0V1 697 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CATSPERZQ9NTU4 200 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 MCM9Q9NXL9 1143 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 PI4KBQ9UBF8 816 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 FTSJ1Q9UET6 329 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 NDOR1Q9UHB4 597 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CROTQ9UKG9 612 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 PCDHA8Q9Y5H6 950 aa5.66□□□□□ -1.5
ATG4AP1-201ENST00000416893 CCL15-CCL14A0A0B4J2E2 113 aa5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 MANSC4A6NHS7 340 aaPredicted RBP5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 M0R2C6 588 aa5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 MAFGO15525 162 aa5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 GPAA1O43292 621 aa5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 CTNND1O60716 968 aaKnown RBP5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 FBXO21O94952 628 aa5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 ENO2P09104 434 aaPredicted RBP5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 CYP2D6P10635 497 aa5.65□□□□□ -1.5
ATG4AP1-201ENST00000416893 TM4SF4P48230 202 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms