RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 KRT19P08727 400 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 DNAJB1P25685 340 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 GCLMP48507 274 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 MCCD1P59942 119 aaPredicted RBP33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 PLCB3Q01970 1234 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 TDRD10Q5VZ19 366 aaKnown RBP33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 SPPL3Q8TCT6 385 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 PRDM12Q9H4Q4 367 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 THAP9Q9H5L6 903 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 METTL14Q9HCE5 456 aaKnown RBP33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 AGAP1Q9UPQ3 857 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 I3L4J1 428 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 GNA14O95837 355 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 C4BPAP04003 597 aaKnown RBP33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 BRCC3P46736 316 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 MYL5Q02045 173 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 USP37Q86T82 979 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 GPR62Q9BZJ7 368 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 ITGA11Q9UKX5 1188 aa33.02■■■□□ 2.88
CSNK1E-206ENST00000413574 IKBKBO14920 756 aa33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 CST3P01034 146 aaPredicted RBP33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 ZNF165P49910 485 aa33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 NCAPHQ15003 741 aa33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 TAS1R1Q7RTX1 841 aa33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 SLC35C1Q96A29 364 aa33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 FANCLQ9NW38 375 aa33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 GTF3C5Q9Y5Q8 519 aaPredicted RBP33.01■■■□□ 2.87
CSNK1E-206ENST00000413574 ATG2AQ2TAZ0 1938 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 TMEM189-UBE2V1I3L0A0 370 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 MARSP56192 900 aaKnown RBP33■■■□□ 2.87
CSNK1E-206ENST00000413574 KRT17Q04695 432 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 ENPEPQ07075 957 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 BIRC3Q13489 604 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 SV2AQ7L0J3 742 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 TRIM59Q8IWR1 403 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 POF1BQ8WVV4 589 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 BPIFA3Q9BQP9 254 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 REV3LO60673 3130 aa33■■■□□ 2.87
CSNK1E-206ENST00000413574 SPTLC1O15269 473 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 LPXNO60711 386 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 FUT10Q6P4F1 479 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 DHX40Q8IX18 779 aaKnown RBP32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 B3GALT6Q96L58 329 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 NUB1Q9Y5A7 615 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 VWA8A3KMH1 1905 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 CARNS1A5YM72 827 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 CAMK1Q14012 370 aa32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 DDX53Q86TM3 631 aaKnown RBP32.99■■■□□ 2.87
CSNK1E-206ENST00000413574 PHACTR2O75167 634 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 VNN1O95497 513 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 EFEMP2O95967 443 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 AP3M2P53677 418 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 LILRA4P59901 499 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 RBP5P82980 135 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 ZACNQ401N2 412 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 GPR153Q6NV75 609 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 LRSAM1Q6UWE0 723 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 C15orf39Q6ZRI6 1047 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 ELMO3Q96BJ8 720 aa32.98■■■□□ 2.87
CSNK1E-206ENST00000413574 CBWD6Q4V339 395 aa32.97■■■□□ 2.87
CSNK1E-206ENST00000413574 TIGD5Q53EQ6 642 aa32.97■■■□□ 2.87
CSNK1E-206ENST00000413574 CBWD3Q5JTY5 395 aa32.97■■■□□ 2.87
CSNK1E-206ENST00000413574 CBWD5Q5RIA9 395 aa32.97■■■□□ 2.87
CSNK1E-206ENST00000413574 CBX8Q9HC52 389 aa32.97■■■□□ 2.87
CSNK1E-206ENST00000413574 SF3B1O75533 1304 aaKnown RBP eCLIP32.96■■■□□ 2.872e-6■■■■■ 43.1
CSNK1E-206ENST00000413574 ERVFC1P60507 584 aa32.96■■■□□ 2.87
CSNK1E-206ENST00000413574 IQCB1Q15051 598 aa32.96■■■□□ 2.87
CSNK1E-206ENST00000413574 VPS52Q8N1B4 723 aa32.96■■■□□ 2.87
CSNK1E-206ENST00000413574 HSD3B7Q9H2F3 369 aa32.96■■■□□ 2.87
CSNK1E-206ENST00000413574 TMEM8AQ9HCN3 771 aa32.96■■■□□ 2.87
CSNK1E-206ENST00000413574 PUF60Q9UHX1 559 aaKnown RBP32.96■■■□□ 2.87
CSNK1E-206ENST00000413574 MYO7AQ13402 2215 aa32.96■■■□□ 2.87
CSNK1E-206ENST00000413574 KCNJ18B7U540 433 aa32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 MTIF2P46199 727 aaKnown RBP32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 KCNJ12Q14500 433 aa32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 FAM171A1Q5VUB5 890 aa32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 CDKAL1Q5VV42 579 aa32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 FAM114A1Q8IWE2 563 aa32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 RNF168Q8IYW5 571 aaPredicted RBP32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 DEFB123Q8N688 67 aa32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 MAGEC2Q9UBF1 373 aaPredicted RBP32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 PCDHGC5Q9Y5F6 944 aa32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 UTP18Q9Y5J1 556 aaKnown RBP eCLIP32.95■■■□□ 2.87
CSNK1E-206ENST00000413574 IRS1P35568 1242 aa32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 TAF6P49848 677 aa32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 MYL6P60660 151 aa32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 TRPC3Q13507 836 aa32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 TAS1R2Q8TE23 839 aa32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 AUTS2Q8WXX7 1259 aa32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.95■■■□□ 2.869e-7■■■■■ 94.3
CSNK1E-206ENST00000413574 LZTS1Q9Y250 596 aa32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 R3HCC1Q9Y3T6 440 aaKnown RBP32.95■■■□□ 2.86
CSNK1E-206ENST00000413574 EYSQ5T1H1 3165 aa32.94■■■□□ 2.86
CSNK1E-206ENST00000413574 LRRN2O75325 713 aa32.94■■■□□ 2.86
CSNK1E-206ENST00000413574 GTF2H1P32780 548 aa32.94■■■□□ 2.86
CSNK1E-206ENST00000413574 MXI1P50539 228 aa32.94■■■□□ 2.86
CSNK1E-206ENST00000413574 UBE3AQ05086 875 aa32.94■■■□□ 2.86
CSNK1E-206ENST00000413574 KCNH2Q12809 1159 aa32.94■■■□□ 2.86
CSNK1E-206ENST00000413574 NCOA4Q13772 614 aa32.94■■■□□ 2.86
CSNK1E-206ENST00000413574 TCP11X2Q5H9J9 407 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms