RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 CTXN3Q4LDR2 81 aa15.5■□□□□ 0.07
NELFE-201ENST00000375425 FAM173BQ6P4H8 233 aa15.5■□□□□ 0.07
NELFE-201ENST00000375425 APPL2Q8NEU8 664 aa15.5■□□□□ 0.07
NELFE-201ENST00000375425 RPF1Q9H9Y2 349 aaKnown RBP15.5■□□□□ 0.07
NELFE-201ENST00000375425 CYP4F11Q9HBI6 524 aa15.5■□□□□ 0.07
NELFE-201ENST00000375425 KCNH3Q9ULD8 1083 aa15.5■□□□□ 0.07
NELFE-201ENST00000375425 SRPRBQ9Y5M8 271 aaKnown RBP15.5■□□□□ 0.07
NELFE-201ENST00000375425 DOCK8Q8NF50 2099 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 CFAP54Q96N23 3096 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 A0A0B4J269 797 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 PRRG1O14668 218 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 OGTO15294 1046 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 SEC24AO95486 1093 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 LRG1P02750 347 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 RHOP08100 348 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 PTPN2P17706 415 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 CYP3A5P20815 502 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 LRPAP1P30533 357 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 GPC5P78333 572 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 CEBPZQ03701 1054 aaKnown RBP15.49■□□□□ 0.07
NELFE-201ENST00000375425 ENOX2Q16206 610 aaKnown RBP15.49■□□□□ 0.07
NELFE-201ENST00000375425 SLC39A4Q6P5W5 647 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 MTSS1LQ765P7 747 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 TCEAL8Q8IYN2 117 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 KRI1Q8N9T8 703 aaKnown RBP15.49■□□□□ 0.07
NELFE-201ENST00000375425 FAM212AQ96EL1 285 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 CLIC6Q96NY7 704 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 MSTO1Q9BUK6 570 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 SLC2A4RGQ9NR83 387 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 UBQLN1Q9UMX0 589 aaKnown RBP15.49■□□□□ 0.07
NELFE-201ENST00000375425 PCDHB8Q9UN66 801 aa15.49■□□□□ 0.07
NELFE-201ENST00000375425 MRPS23Q9Y3D9 190 aaKnown RBP15.49■□□□□ 0.07
NELFE-201ENST00000375425 M0QZQ0 153 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 ADRB2P07550 413 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 RFX1P22670 979 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 GUCY2FP51841 1108 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 RESTQ13127 1097 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 SLC5A9Q2M3M2 681 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 ZC2HC1CQ53FD0 456 aaPredicted RBP15.48■□□□□ 0.07
NELFE-201ENST00000375425 TPGS2Q68CL5 300 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 ZNF280DQ6N043 979 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 DYMQ7RTS9 669 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 ING5Q8WYH8 240 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 INTS4Q96HW7 963 aaKnown RBP15.48■□□□□ 0.07
NELFE-201ENST00000375425 BACH2Q9BYV9 841 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 CCDC39Q9UFE4 941 aa15.48■□□□□ 0.07
NELFE-201ENST00000375425 FBXO2Q9UK22 296 aaPredicted RBP15.48■□□□□ 0.07
NELFE-201ENST00000375425 TIMM13Q9Y5L4 95 aaPredicted RBP15.48■□□□□ 0.07
NELFE-201ENST00000375425 ZFHX2Q9C0A1 2572 aaPredicted RBP15.47■□□□□ 0.07
NELFE-201ENST00000375425 ANKRD63C9JTQ0 380 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 XPOTO43592 962 aaKnown RBP15.47■□□□□ 0.07
NELFE-201ENST00000375425 OAZ2O95190 189 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 ABCD1P33897 745 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 YWHAHQ04917 246 aaPredicted RBP15.47■□□□□ 0.07
NELFE-201ENST00000375425 ADCY1Q08828 1119 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 ZNF720Q7Z2F6 126 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 MAP4K3Q8IVH8 894 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 NPAS3Q8IXF0 933 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 DTWD2Q8NBA8 298 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 MCRS1Q96EZ8 462 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 TSPAN18Q96SJ8 248 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 CORO1BQ9BR76 489 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 TBC1D17Q9HA65 648 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 ARHGEF3Q9NR81 526 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 AFF4Q9UHB7 1163 aaKnown RBP15.47■□□□□ 0.07
NELFE-201ENST00000375425 CPSF3Q9UKF6 684 aaKnown RBP15.47■□□□□ 0.07
NELFE-201ENST00000375425 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.47■□□□□ 0.07
NELFE-201ENST00000375425 MYH11P35749 1972 aa15.47■□□□□ 0.07
NELFE-201ENST00000375425 ACOT2P49753 483 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 SPATA1Q5VX52 437 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 RRAGBQ5VZM2 374 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 ADALQ6DHV7 355 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 JADE1Q6IE81 842 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 PHLDB3Q6NSJ2 640 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 POTEHQ6S545 545 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 DSTYKQ6XUX3 929 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 RNF19BQ6ZMZ0 732 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 CD302Q8IX05 232 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 CCDC105Q8IYK2 499 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 KXD1Q9BQD3 176 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 ST6GALNAC4Q9H4F1 302 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 AVENQ9NQS1 362 aaPredicted RBP15.46■□□□□ 0.07
NELFE-201ENST00000375425 GDE1Q9NZC3 331 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 STK17AQ9UEE5 414 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 MTMR6Q9Y217 621 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 INSL5Q9Y5Q6 135 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 CITO14578 2027 aa15.46■□□□□ 0.07
NELFE-201ENST00000375425 MYMKA6NI61 221 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 TISP43B9A030 160 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 PPEF2O14830 753 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 GFRA3O60609 400 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 CPB1P15086 417 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 TXLNAP40222 546 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 AARSP49588 968 aaKnown RBP eCLIP15.45■□□□□ 0.06
NELFE-201ENST00000375425 LILRA4P59901 499 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 SV2BQ7L1I2 683 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 USP37Q86T82 979 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 SFR1Q86XK3 245 aa15.45■□□□□ 0.06
NELFE-201ENST00000375425 BEST2Q8NFU1 509 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms