RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ACP6Q9NPH0 428 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 NAGPAQ9UK23 515 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 CLSTN1O94985 981 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 XKR4Q5GH76 650 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 CCDC122Q5T0U0 273 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 SYT10Q6XYQ8 523 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 NOP9Q86U38 636 aaKnown RBP24.88■■□□□ 1.57
SDF4-202ENST00000360001 SLC47A2Q86VL8 602 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 GLYCTKQ8IVS8 523 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 DPP3Q9NY33 737 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 NOCTQ9UK39 431 aaKnown RBP24.88■■□□□ 1.57
SDF4-202ENST00000360001 ITGA11Q9UKX5 1188 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 PCDHB2Q9Y5E7 798 aa24.88■■□□□ 1.57
SDF4-202ENST00000360001 KRT5P13647 590 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 PAK2Q13177 524 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 UBR7Q8N806 425 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 AGPAT1Q99943 283 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 PARP2Q9UGN5 583 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 SQORQ9Y6N5 450 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 HSPA8P11142 646 aaKnown RBP24.87■■□□□ 1.57
SDF4-202ENST00000360001 NAB2Q15742 525 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 ALKBH5Q6P6C2 394 aaKnown RBP24.87■■□□□ 1.57
SDF4-202ENST00000360001 CTU1Q7Z7A3 348 aaKnown RBP24.87■■□□□ 1.57
SDF4-202ENST00000360001 FAM105AQ9NUU6 356 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 KLK14Q9P0G3 267 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 GUCA1BQ9UMX6 200 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 CNTN6Q9UQ52 1028 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 DUSP10Q9Y6W6 482 aa24.87■■□□□ 1.57
SDF4-202ENST00000360001 FANCGO15287 622 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 PJA2O43164 708 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 KRT86O43790 486 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 CYP11B1P15538 503 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 POLR2BP30876 1174 aaKnown RBP24.86■■□□□ 1.57
SDF4-202ENST00000360001 GNG11P61952 73 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 KIF5AQ12840 1032 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 FAM126BQ8IXS8 530 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 USP38Q8NB14 1042 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 ZNF592Q92610 1267 aa24.86■■□□□ 1.57
SDF4-202ENST00000360001 MGEA5O60502 916 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 CHRNB2P17787 502 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 TNFAIP3P21580 790 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 ATICP31939 592 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 ASPAP45381 313 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 DSC3Q14574 896 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 GLRA4Q5JXX5 417 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 C10orf76Q5T2E6 689 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 WDR24Q96S15 920 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 TSGA10Q9BZW7 698 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 VRTNQ9H8Y1 702 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 LUC7LQ9NQ29 371 aaKnown RBP24.85■■□□□ 1.57
SDF4-202ENST00000360001 RNF19AQ9NV58 838 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 AGAP1Q9UPQ3 857 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 SMIM28A0A1B0GU29 152 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 KIF5CO60282 957 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 KCNE1P15382 129 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 RPUSD2Q8IZ73 545 aaKnown RBP24.85■■□□□ 1.57
SDF4-202ENST00000360001 U2AF1L4Q8WU68 220 aaKnown RBP24.85■■□□□ 1.57
SDF4-202ENST00000360001 C18orf25Q96B23 403 aaPredicted RBP24.85■■□□□ 1.57
SDF4-202ENST00000360001 ZNF333Q96JL9 665 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 PACSIN1Q9BY11 444 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 TUBGCP4Q9UGJ1 667 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 DNAI1Q9UI46 699 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 PCDHB4Q9Y5E5 795 aa24.85■■□□□ 1.57
SDF4-202ENST00000360001 ZSCAN20P17040 1043 aaPredicted RBP24.84■■□□□ 1.57
SDF4-202ENST00000360001 PDE6CP51160 858 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 RBP5P82980 135 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 MBTPS1Q14703 1052 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 PALB2Q86YC2 1186 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 DDX1Q92499 740 aaKnown RBP24.84■■□□□ 1.57
SDF4-202ENST00000360001 TSPAN18Q96SJ8 248 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 TRAIPQ9BWF2 469 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 CRISPLD2Q9H0B8 497 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 POLIQ9UNA4 740 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 STAU1O95793 577 aaKnown RBP24.84■■□□□ 1.57
SDF4-202ENST00000360001 CD4P01730 458 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 WDR72Q3MJ13 1102 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 ZNF667Q5HYK9 610 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 FBXO46Q6PJ61 603 aaPredicted RBP24.84■■□□□ 1.57
SDF4-202ENST00000360001 TMEM270Q6UE05 265 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 SCARA5Q6ZMJ2 495 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 TXLNBQ8N3L3 684 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 BEST2Q8NFU1 509 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 HPDLQ96IR7 371 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 FAXDC2Q96IV6 333 aa24.84■■□□□ 1.57
SDF4-202ENST00000360001 NXF1Q9UBU9 619 aaKnown RBP24.84■■□□□ 1.57
SDF4-202ENST00000360001 MEIS3P2A8K0S8 358 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 CALCAP01258 141 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 MNX1P50219 401 aaPredicted RBP24.83■■□□□ 1.57
SDF4-202ENST00000360001 TAF3Q5VWG9 929 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 DNAAF5Q86Y56 855 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 KIF18AQ8NI77 898 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 CAGE1Q8TC20 777 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 BCO2Q9BYV7 579 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 CISHQ9NSE2 258 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 MYO1AQ9UBC5 1043 aa24.83■■□□□ 1.57
SDF4-202ENST00000360001 UBQLN1Q9UMX0 589 aaKnown RBP24.83■■□□□ 1.57
SDF4-202ENST00000360001 ATP8B3O60423 1300 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 ZNF132P52740 706 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 FMO1Q01740 532 aa24.82■■□□□ 1.56
SDF4-202ENST00000360001 CDR2Q01850 454 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms