RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 ARID3AQ99856 593 aa16.76■□□□□ 0.27
CTSA-202ENST00000354880 UBQLN1Q9UMX0 589 aaKnown RBP16.76■□□□□ 0.27
CTSA-202ENST00000354880 XPOTO43592 962 aaKnown RBP16.75■□□□□ 0.27
CTSA-202ENST00000354880 OFD1O75665 1012 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 POLR2BP30876 1174 aaKnown RBP16.75■□□□□ 0.27
CTSA-202ENST00000354880 ATICP31939 592 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 GUCY2FP51841 1108 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 KRT83P78385 493 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 RBP5P82980 135 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 TLE2Q04725 743 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 TRIM60Q495X7 471 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 ZNF571Q7Z3V5 609 aaPredicted RBP16.75■□□□□ 0.27
CTSA-202ENST00000354880 MRPL10Q7Z7H8 261 aaKnown RBP16.75■□□□□ 0.27
CTSA-202ENST00000354880 TMEM130Q8N3G9 435 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 TMEM106CQ9BVX2 250 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 NIF3L1Q9GZT8 377 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 AGAP1Q9UPQ3 857 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 UMODL1Q5DID0 1318 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 MEIS3P2A8K0S8 358 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 LCA5LO95447 670 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 SKIP12755 728 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 ANXA13P27216 316 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 FAAP100Q0VG06 881 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 SPA17Q15506 151 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 REXO1L1PQ8IX06 675 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 VRTNQ9H8Y1 702 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 RNF19AQ9NV58 838 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 TUBGCP4Q9UGJ1 667 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 ADAMTS1Q9UHI8 967 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 GIT1Q9Y2X7 761 aa16.75■□□□□ 0.27
CTSA-202ENST00000354880 CAPN2P17655 700 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 CLCN1P35523 988 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 ZNF667Q5HYK9 610 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 VPS36Q86VN1 386 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 LPPQ93052 612 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 C18orf25Q96B23 403 aaPredicted RBP16.74■□□□□ 0.27
CTSA-202ENST00000354880 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 PAWRQ96IZ0 340 aaKnown RBP16.74■□□□□ 0.27
CTSA-202ENST00000354880 ZFP42Q96MM3 310 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.74■□□□□ 0.27
CTSA-202ENST00000354880 FTHL17Q9BXU8 183 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 HIPK3Q9H422 1215 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 C11orf49Q9H6J7 331 aa16.74■□□□□ 0.27
CTSA-202ENST00000354880 REXO2Q9Y3B8 237 aaKnown RBP16.74■□□□□ 0.27
CTSA-202ENST00000354880 GOLGA6L9A6NEM1 432 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 ZNF263O14978 683 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 CYP26A1O43174 497 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 NBNO60934 754 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 KRT5P13647 590 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 CYP27A1Q02318 531 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 GFPT1Q06210 699 aaPredicted RBP16.73■□□□□ 0.27
CTSA-202ENST00000354880 SLC18A3Q16572 532 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 WDR72Q3MJ13 1102 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 AGMOQ6ZNB7 445 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 PGBD4Q96DM1 585 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 HPDLQ96IR7 371 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 RPS6KC1Q96S38 1066 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 RRAGDQ9NQL2 400 aaPredicted RBP16.73■□□□□ 0.27
CTSA-202ENST00000354880 RGS18Q9NS28 235 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 NXF1Q9UBU9 619 aaKnown RBP16.73■□□□□ 0.27
CTSA-202ENST00000354880 ATP11BQ9Y2G3 1177 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 PTGESO14684 152 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 STAU1O95793 577 aaKnown RBP16.73■□□□□ 0.27
CTSA-202ENST00000354880 ATF7P17544 494 aaPredicted RBP16.73■□□□□ 0.27
CTSA-202ENST00000354880 CYP3A5P20815 502 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 ACO1P21399 889 aaKnown RBP16.73■□□□□ 0.27
CTSA-202ENST00000354880 MLH1P40692 756 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 ASPAP45381 313 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 MYO1EQ12965 1108 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 BMS1Q14692 1282 aaKnown RBP16.73■□□□□ 0.27
CTSA-202ENST00000354880 GPNMBQ14956 572 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 GAD1Q99259 594 aa16.73■□□□□ 0.27
CTSA-202ENST00000354880 A0A087X0T9 212 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 ARL5CA6NH57 179 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 FAM228BP0C875 321 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 P4HA1P13674 534 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 PLEKHG4Q58EX7 1191 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 SCARA5Q6ZMJ2 495 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 SLC24A5Q71RS6 500 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 RTN4RL1Q86UN2 441 aaPredicted RBP16.72■□□□□ 0.27
CTSA-202ENST00000354880 SLC47A2Q86VL8 602 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 ECHDC2Q86YB7 292 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 LRRC52Q8N7C0 313 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 RNF169Q8NCN4 708 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 GSTCDQ8NEC7 633 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 EPS8L1Q8TE68 723 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 PPP1R10Q96QC0 940 aaKnown RBP16.72■□□□□ 0.27
CTSA-202ENST00000354880 SYT11Q9BT88 431 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 UBN1Q9NPG3 1134 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 PCDHB4Q9Y5E5 795 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 SCN1AP35498 2009 aa16.72■□□□□ 0.27
CTSA-202ENST00000354880 TANC1Q9C0D5 1861 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 ANO9A1A5B4 782 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 C9IYK1 514 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 PARNO95453 639 aaKnown RBP16.71■□□□□ 0.27
CTSA-202ENST00000354880 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
CTSA-202ENST00000354880 C9orf57Q5W0N0 161 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms