RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TPRNQ4KMQ1 711 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 DCAF17Q5H9S7 520 aaPredicted RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 TRAPPC11Q7Z392 1133 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CNGA4Q8IV77 575 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CCDC112Q8NEF3 446 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 PCMTD1Q96MG8 357 aaPredicted RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 SH2D3AQ9BRG2 576 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CDHR5Q9HBB8 845 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 TBC1D13Q9NVG8 400 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 RAB20Q9NX57 234 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CDH9Q9ULB4 789 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 ALPK3Q96L96 1907 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 PIRO00625 290 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 B4GALT5O43286 388 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CCP110O43303 1012 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 FAM189A1O60320 539 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 ADSSP30520 456 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 GLUD2P49448 558 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 UBASH3AP57075 661 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 KCNH2Q12809 1159 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 IQCB1Q15051 598 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 C9orf57Q5W0N0 161 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 JADE1Q6IE81 842 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 COLGALT2Q8IYK4 626 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 SLC39A11Q8N1S5 342 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 KIAA1958Q8N8K9 716 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 RNF169Q8NCN4 708 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 HELQQ8TDG4 1101 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 FAM212AQ96EL1 285 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 BORCS6Q96GS4 357 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 GAD1Q99259 594 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 NAA15Q9BXJ9 866 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 EIF2AQ9BY44 585 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 NXF3Q9H4D5 531 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 SLC28A3Q9HAS3 691 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 RC3H2Q9HBD1 1191 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CEP72Q9P209 647 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 ADAM28Q9UKQ2 775 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 ASB3Q9Y575 518 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 A0A1B0GTH6 734 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 M0QZQ0 153 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 PES1O00541 588 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 AKAP3O75969 853 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 ASS1P00966 412 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 HLA-DRAP01903 254 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 C4BPAP04003 597 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 SOD2P04179 222 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 ADH1AP07327 375 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 MLH1P40692 756 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 STAT1P42224 750 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 RPL10AP62906 217 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 FANCCQ00597 558 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 C15orf39Q6ZRI6 1047 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 LINC01599Q8WXQ3 324 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 PIK3R5Q8WYR1 880 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 SLC35C1Q96A29 364 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 HPDLQ96IR7 371 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 CDK5RAP1Q96SZ6 601 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 PPP1R16BQ96T49 567 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 APOL6Q9BWW8 343 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 INTS2Q9H0H0 1204 aaKnown RBP5.55□□□□□ -1.52
LRIT3-201ENST00000327908 PCIF1Q9H4Z3 704 aa5.55□□□□□ -1.52
LRIT3-201ENST00000327908 TRIP12Q14669 1992 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 A0A087WWV3 80 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 LRRIQ3A6PVS8 624 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 H0YGN5 161 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CLSTN1O94985 981 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 IPO7O95373 1038 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 DLATP10515 647 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CD44P16070 742 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 PTGS1P23219 599 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CTNNB1P35222 781 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 HOXD13P35453 343 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 PPP3CCP48454 512 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 SCNN1GP51170 649 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 KRT31Q15323 416 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 EPC2Q52LR7 807 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 C10orf76Q5T2E6 689 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ACBD5Q5T8D3 534 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF697Q5TEC3 545 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 KCNT2Q6UVM3 1135 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CACNA2D4Q7Z3S7 1137 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 TADA2BQ86TJ2 420 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CBWD2Q8IUF1 395 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 TMEM192Q8IY95 271 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ELMOD1Q8N336 334 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ARHGAP18Q8N392 663 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 SPPL2BQ8TCT7 592 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 TIFAQ96CG3 184 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 SAAL1Q96ER3 474 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 UBXN6Q9BZV1 441 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF518BQ9C0D4 1074 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 MRPL17Q9NRX2 175 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 RNF19AQ9NV58 838 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 AGAP1Q9UPQ3 857 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 INPP5FQ9Y2H2 1132 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 IRAK3Q9Y616 596 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms