RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TMX2Q9Y320 296 aa17.21■□□□□ 0.34
CCDC8-201ENST00000307522 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 A0A0G2JND7 137 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 GSTTP1A0A1W2PQM5 241 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 SIGLEC16A6NMB1 481 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 TISP43B9A030 160 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 AMPD1P23109 780 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 THOC5Q13769 683 aaKnown RBP17.2■□□□□ 0.34
CCDC8-201ENST00000307522 RIBC1Q8N443 379 aaPredicted RBP17.2■□□□□ 0.34
CCDC8-201ENST00000307522 WRNIP1Q96S55 665 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 STMN4Q9H169 189 aaPredicted RBP17.2■□□□□ 0.34
CCDC8-201ENST00000307522 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
CCDC8-201ENST00000307522 ZFP69BQ9UJL9 534 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 NAALADL1Q9UQQ1 740 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 RIPK3Q9Y572 518 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 OPHN1O60890 802 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 POLR2MP0CAP2 368 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 CYP11B2P19099 503 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 RASSF2P50749 326 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 SOX10P56693 466 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 CALCOCO2Q13137 446 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 COG2Q14746 738 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 SYN2Q92777 582 aaPredicted RBP17.2■□□□□ 0.34
CCDC8-201ENST00000307522 DNAJC19Q96DA6 116 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 ACP6Q9NPH0 428 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 FBXO6Q9NRD1 293 aaPredicted RBP17.2■□□□□ 0.34
CCDC8-201ENST00000307522 AAASQ9NRG9 546 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 CTTNBP2NLQ9P2B4 639 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 BZW2Q9Y6E2 419 aaKnown RBP17.2■□□□□ 0.34
CCDC8-201ENST00000307522 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
CCDC8-201ENST00000307522 CCDC160A6NGH7 325 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 ZBED4O75132 1171 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 WFS1O76024 890 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 PYGMP11217 842 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 MARK3P27448 753 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 C4orf50Q6ZRC1 276 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 EPM2AIP1Q7L775 607 aaPredicted RBP17.19■□□□□ 0.34
CCDC8-201ENST00000307522 CLPTM1LQ96KA5 538 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 DCLRE1BQ9H816 532 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 DDX18Q9NVP1 670 aaKnown RBP17.19■□□□□ 0.34
CCDC8-201ENST00000307522 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCDC8-201ENST00000307522 ALG6Q9Y672 507 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 CES2O00748 559 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 EXOC3O60645 756 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 GCNT3O95395 438 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 SPATA31C1P0DKV0 1188 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 FGFR1P11362 822 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 TMED1Q13445 227 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 GIT2Q14161 759 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 IZUMO2Q6UXV1 221 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 MOB2Q70IA6 237 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 SCFD1Q8WVM8 642 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 EIF2AK1Q9BQI3 630 aaKnown RBP17.19■□□□□ 0.34
CCDC8-201ENST00000307522 ZWILCHQ9H900 591 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 TESPA1A2RU30 521 aaPredicted RBP17.19■□□□□ 0.34
CCDC8-201ENST00000307522 GAS7O60861 476 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 LYNP07948 512 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 RARGP13631 454 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 SMARCA1P28370 1054 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 ZCWPW2Q504Y3 356 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 FAM182AQ5T1J6 154 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 DAB2IPQ5VWQ8 1189 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 RNF43Q68DV7 783 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 SLFN11Q7Z7L1 901 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 SYCE1Q8N0S2 351 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 ARMCX1Q9P291 453 aa17.19■□□□□ 0.34
CCDC8-201ENST00000307522 HERC5Q9UII4 1024 aaKnown RBP17.19■□□□□ 0.34
CCDC8-201ENST00000307522 MAPK13O15264 365 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 DYNC1I2Q13409 638 aaKnown RBP17.18■□□□□ 0.34
CCDC8-201ENST00000307522 PDIA5Q14554 519 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 VPS36Q86VN1 386 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 ARL10Q8N8L6 244 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 SHKBP1Q8TBC3 707 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 ETNPPLQ8TBG4 499 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 STMN2Q93045 179 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 MCUR1Q96AQ8 359 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 ATG4CQ96DT6 458 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 BICD1Q96G01 975 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 GMCL1Q96IK5 515 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 KLF6Q99612 283 aaPredicted RBP17.18■□□□□ 0.34
CCDC8-201ENST00000307522 EDEM3Q9BZQ6 932 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 DMAP1Q9NPF5 467 aaPredicted RBP17.18■□□□□ 0.34
CCDC8-201ENST00000307522 ARL8BQ9NVJ2 186 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 DNM3Q9UQ16 869 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.18■□□□□ 0.34
CCDC8-201ENST00000307522 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.18■□□□□ 0.34
CCDC8-201ENST00000307522 PHF2O75151 1096 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 VCAM1P19320 739 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC8-201ENST00000307522 VPS52Q8N1B4 723 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 PDCD7Q8N8D1 485 aaKnown RBP17.18■□□□□ 0.34
CCDC8-201ENST00000307522 ZNF577Q9BSK1 485 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 KRT82Q9NSB4 513 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 EMILIN3Q9NT22 766 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
CCDC8-201ENST00000307522 GOLGA8RI6L899 631 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 TTC7BQ86TV6 843 aa17.17■□□□□ 0.34
CCDC8-201ENST00000307522 TRIM42Q8IWZ5 723 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms