RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C YPL272CQ08984 517 aa5.29□□□□□ -1.56
VPS4YPR173C COA6Q3E846 104 aa5.29□□□□□ -1.56
VPS4YPR173C RPP2AP05319 106 aaKnown RBP5.28□□□□□ -1.56
VPS4YPR173C SGA1P08019 549 aa5.28□□□□□ -1.56
VPS4YPR173C CDC50P25656 391 aa5.28□□□□□ -1.56
VPS4YPR173C RFA3P26755 122 aaKnown RBP5.28□□□□□ -1.56
VPS4YPR173C NRP1P32770 719 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
VPS4YPR173C MRPS9P38120 278 aa5.28□□□□□ -1.56
VPS4YPR173C MNL1P38888 796 aa5.28□□□□□ -1.56
VPS4YPR173C GET2P40056 285 aa5.28□□□□□ -1.56
VPS4YPR173C ERJ5P43613 295 aaPredicted RBP5.28□□□□□ -1.56
VPS4YPR173C IKS1P47042 667 aa5.28□□□□□ -1.56
VPS4YPR173C ASK10P48361 1146 aa5.28□□□□□ -1.56
VPS4YPR173C ALG9P53868 555 aaKnown RBP5.28□□□□□ -1.56
VPS4YPR173C NCE101Q02820 53 aa5.28□□□□□ -1.56
VPS4YPR173C YDR415CQ04033 374 aaPredicted RBP5.28□□□□□ -1.56
VPS4YPR173C THI74Q04083 370 aa5.28□□□□□ -1.56
VPS4YPR173C BNA5Q05979 453 aa5.28□□□□□ -1.56
VPS4YPR173C IRC13Q08630 104 aa5.28□□□□□ -1.56
VPS4YPR173C MCP1Q12106 302 aa5.28□□□□□ -1.56
VPS4YPR173C UBA3Q99344 299 aa5.28□□□□□ -1.56
VPS4YPR173C MIR1P23641 311 aaKnown RBP5.27□□□□□ -1.57
VPS4YPR173C MEK1P24719 497 aaPredicted RBP5.27□□□□□ -1.57
VPS4YPR173C YCR101CP25607 182 aa5.27□□□□□ -1.57
VPS4YPR173C YAL037WP39728 267 aa5.27□□□□□ -1.57
VPS4YPR173C MOB1P40484 314 aa5.27□□□□□ -1.57
VPS4YPR173C XBP1P40489 647 aa5.27□□□□□ -1.57
VPS4YPR173C PHS1P40857 217 aa5.27□□□□□ -1.57
VPS4YPR173C ZIM17P42844 174 aa5.27□□□□□ -1.57
VPS4YPR173C YJR141WP47172 347 aaPredicted RBP5.27□□□□□ -1.57
VPS4YPR173C BNS1P50084 137 aa5.27□□□□□ -1.57
VPS4YPR173C TDA7P53882 636 aaPredicted RBP5.27□□□□□ -1.57
VPS4YPR173C ERG13P54839 491 aaKnown RBP5.27□□□□□ -1.57
VPS4YPR173C CYT2Q00873 224 aa5.27□□□□□ -1.57
VPS4YPR173C YDC1Q02896 317 aa5.27□□□□□ -1.57
VPS4YPR173C SRO7Q12038 1033 aa5.27□□□□□ -1.57
VPS4YPR173C RLM1Q12224 676 aa5.27□□□□□ -1.57
VPS4YPR173C GDH1P07262 454 aaKnown RBP5.26□□□□□ -1.57
VPS4YPR173C MET3P08536 511 aa5.26□□□□□ -1.57
VPS4YPR173C PAU19P0CE85 124 aa5.26□□□□□ -1.57
VPS4YPR173C PAU21P0CE86 164 aa5.26□□□□□ -1.57
VPS4YPR173C PAU22P0CE87 164 aa5.26□□□□□ -1.57
VPS4YPR173C FUN14P18411 198 aa5.26□□□□□ -1.57
VPS4YPR173C STE18P18852 110 aa5.26□□□□□ -1.57
VPS4YPR173C RPB8P20436 146 aa5.26□□□□□ -1.57
VPS4YPR173C PAU3P25610 124 aa5.26□□□□□ -1.57
VPS4YPR173C FRM2P37261 193 aa5.26□□□□□ -1.57
VPS4YPR173C MED6P38782 295 aa5.26□□□□□ -1.57
VPS4YPR173C WSS1P38838 269 aa5.26□□□□□ -1.57
VPS4YPR173C NAS2P40555 220 aa5.26□□□□□ -1.57
VPS4YPR173C RTS2P40962 232 aa5.26□□□□□ -1.57
VPS4YPR173C SLX9P53251 210 aaPredicted RBP5.26□□□□□ -1.57
VPS4YPR173C SAM50P53969 484 aa5.26□□□□□ -1.57
VPS4YPR173C VPS28Q02767 242 aa5.26□□□□□ -1.57
VPS4YPR173C YDR387CQ04162 555 aa5.26□□□□□ -1.57
VPS4YPR173C YOL073CQ08232 322 aa5.26□□□□□ -1.57
VPS4YPR173C ENB1Q08299 606 aa5.26□□□□□ -1.57
VPS4YPR173C ATX2Q12067 313 aa5.26□□□□□ -1.57
VPS4YPR173C YOR015WQ12169 119 aa5.26□□□□□ -1.57
VPS4YPR173C IZH2Q12442 317 aa5.26□□□□□ -1.57
VPS4YPR173C RPL1AP0CX43 217 aaKnown RBP5.25□□□□□ -1.57
VPS4YPR173C RPL1BP0CX44 217 aaKnown RBP5.25□□□□□ -1.57
VPS4YPR173C PTP1P25044 335 aa5.25□□□□□ -1.57
VPS4YPR173C LSB5P25369 354 aa5.25□□□□□ -1.57
VPS4YPR173C URK1P27515 501 aa5.25□□□□□ -1.57
VPS4YPR173C SLM6P38343 150 aa5.25□□□□□ -1.57
VPS4YPR173C LYS1P38998 373 aaRIP-Chip data5.25□□□□□ -1.57not detected
VPS4YPR173C LRO1P40345 661 aa5.25□□□□□ -1.57
VPS4YPR173C MOB2P43563 287 aa5.25□□□□□ -1.57
VPS4YPR173C YJR011CP47086 261 aaPredicted RBP5.25□□□□□ -1.57
VPS4YPR173C PMT3P47190 753 aa5.25□□□□□ -1.57
VPS4YPR173C HCH1P53834 153 aa5.25□□□□□ -1.57
VPS4YPR173C RNH201P53942 307 aa5.25□□□□□ -1.57
VPS4YPR173C SKO1Q02100 647 aa5.25□□□□□ -1.57
VPS4YPR173C PET191Q02772 108 aa5.25□□□□□ -1.57
VPS4YPR173C EKI1Q03764 534 aa5.25□□□□□ -1.57
VPS4YPR173C SEN15Q04675 128 aa5.25□□□□□ -1.57
VPS4YPR173C TMA10Q06177 86 aa5.25□□□□□ -1.57
VPS4YPR173C TGS1Q12052 315 aa5.25□□□□□ -1.57
VPS4YPR173C ERP4Q12450 207 aa5.25□□□□□ -1.57
VPS4YPR173C NAG1Q8TGN9 163 aa5.25□□□□□ -1.57
VPS4YPR173C RPL25P04456 142 aaKnown RBP5.24□□□□□ -1.57
VPS4YPR173C MSW1P04803 379 aa5.24□□□□□ -1.57
VPS4YPR173C MAK32P23060 363 aa5.24□□□□□ -1.57
VPS4YPR173C EHD3P28817 500 aa5.24□□□□□ -1.57
VPS4YPR173C ALK2P32789 676 aaPredicted RBP5.24□□□□□ -1.57
VPS4YPR173C YHR180WP38868 163 aa5.24□□□□□ -1.57
VPS4YPR173C IRC24P40580 263 aa5.24□□□□□ -1.57
VPS4YPR173C SMD3P43321 101 aaKnown RBP5.24□□□□□ -1.57
VPS4YPR173C GWT1P47026 490 aa5.24□□□□□ -1.57
VPS4YPR173C BRR6P53062 197 aa5.24□□□□□ -1.57
VPS4YPR173C TEX1P53851 422 aaKnown RBP5.24□□□□□ -1.57
VPS4YPR173C YMR082CQ04276 118 aa5.24□□□□□ -1.57
VPS4YPR173C RXT3Q07458 294 aa5.24□□□□□ -1.57
VPS4YPR173C YOR343CQ12484 108 aa5.24□□□□□ -1.57
VPS4YPR173C TMA17Q12513 150 aa5.24□□□□□ -1.57
VPS4YPR173C CDC28P00546 298 aaKnown RBP5.23□□□□□ -1.57
VPS4YPR173C SEC62P21825 274 aa5.23□□□□□ -1.57
VPS4YPR173C KRR1P25586 316 aaPredicted RBP5.23□□□□□ -1.57
VPS4YPR173C AGA2P32781 87 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms