RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W ERG24P32462 438 aaKnown RBP3.97□□□□□ -1.77
ROT1YMR200W PTM1P32857 523 aa3.97□□□□□ -1.77
ROT1YMR200W DOG2P38773 246 aa3.97□□□□□ -1.77
ROT1YMR200W DOG1P38774 246 aa3.97□□□□□ -1.77
ROT1YMR200W RMD6P39975 231 aa3.97□□□□□ -1.77
ROT1YMR200W YIL012WP40551 113 aa3.97□□□□□ -1.77
ROT1YMR200W YFL067WP43537 175 aa3.97□□□□□ -1.77
ROT1YMR200W YJR085CP47131 105 aaKnown RBP3.97□□□□□ -1.77
ROT1YMR200W PRM8P53174 237 aa3.97□□□□□ -1.77
ROT1YMR200W AAH1P53909 347 aa3.97□□□□□ -1.77
ROT1YMR200W MRX11Q03079 207 aa3.97□□□□□ -1.77
ROT1YMR200W YTH1Q06102 208 aaPredicted RBP3.97□□□□□ -1.77
ROT1YMR200W YHR214C-EQ8TGK0 99 aa3.97□□□□□ -1.77
ROT1YMR200W SPA2P23201 1466 aaKnown RBP3.97□□□□□ -1.77
ROT1YMR200W SIR2P06700 562 aa3.96□□□□□ -1.78
ROT1YMR200W MRS3P10566 314 aa3.96□□□□□ -1.78
ROT1YMR200W SNF4P12904 322 aa3.96□□□□□ -1.78
ROT1YMR200W ATG22P25568 528 aa3.96□□□□□ -1.78
ROT1YMR200W AHC2P25649 128 aa3.96□□□□□ -1.78
ROT1YMR200W CSG2P35206 410 aa3.96□□□□□ -1.78
ROT1YMR200W POP8P38208 133 aa3.96□□□□□ -1.78
ROT1YMR200W YND1P40009 630 aa3.96□□□□□ -1.78
ROT1YMR200W YER137CP40083 148 aaKnown RBP3.96□□□□□ -1.78
ROT1YMR200W PRM5P40476 318 aa3.96□□□□□ -1.78
ROT1YMR200W YIL067CP40514 678 aa3.96□□□□□ -1.78
ROT1YMR200W RPR2P40571 144 aa3.96□□□□□ -1.78
ROT1YMR200W YFL064CP43540 174 aa3.96□□□□□ -1.78
ROT1YMR200W CCC1P47818 322 aa3.96□□□□□ -1.78
ROT1YMR200W ERV29P53337 310 aa3.96□□□□□ -1.78
ROT1YMR200W WSC2P53832 503 aa3.96□□□□□ -1.78
ROT1YMR200W TMA20P89886 181 aaPredicted RBP3.96□□□□□ -1.78
ROT1YMR200W RAV2Q03956 351 aa3.96□□□□□ -1.78
ROT1YMR200W SHH4Q06236 168 aa3.96□□□□□ -1.78
ROT1YMR200W YPL257WQ08974 193 aa3.96□□□□□ -1.78
ROT1YMR200W YPR202WQ08993 238 aa3.96□□□□□ -1.78
ROT1YMR200W YBL008W-AQ3E821 79 aa3.96□□□□□ -1.78
ROT1YMR200W YHL044WP38727 235 aa3.95□□□□□ -1.78
ROT1YMR200W EFM1P38732 585 aa3.95□□□□□ -1.78
ROT1YMR200W PHB1P40961 287 aa3.95□□□□□ -1.78
ROT1YMR200W APS3P47064 194 aa3.95□□□□□ -1.78
ROT1YMR200W ILM1P47155 203 aa3.95□□□□□ -1.78
ROT1YMR200W CSN9Q03981 162 aa3.95□□□□□ -1.78
ROT1YMR200W HPT1Q04178 221 aaKnown RBP3.95□□□□□ -1.78
ROT1YMR200W HCR1Q05775 265 aaKnown RBP3.95□□□□□ -1.78
ROT1YMR200W RIB3Q99258 208 aa3.95□□□□□ -1.78
ROT1YMR200W Q0144Q9ZZW2 109 aa3.95□□□□□ -1.78
ROT1YMR200W MDS3P53094 1487 aa3.94□□□□□ -1.78
ROT1YMR200W YHR139C-AO13536 103 aa3.94□□□□□ -1.78
ROT1YMR200W RPL15AP05748 204 aaKnown RBP3.94□□□□□ -1.78
ROT1YMR200W PBI2P0CT04 75 aaKnown RBP3.94□□□□□ -1.78
ROT1YMR200W BGL2P15703 313 aaKnown RBP3.94□□□□□ -1.78
ROT1YMR200W MRPS28P21771 286 aa3.94□□□□□ -1.78
ROT1YMR200W PEX34P25584 144 aa3.94□□□□□ -1.78
ROT1YMR200W SUA7P29055 345 aaPredicted RBP3.94□□□□□ -1.78
ROT1YMR200W PRS3P38689 320 aaKnown RBP3.94□□□□□ -1.78
ROT1YMR200W TRR2P38816 342 aa3.94□□□□□ -1.78
ROT1YMR200W PTI1P39927 425 aaPredicted RBP3.94□□□□□ -1.78
ROT1YMR200W CAT5P41735 233 aa3.94□□□□□ -1.78
ROT1YMR200W RBL2P48606 106 aaKnown RBP3.94□□□□□ -1.78
ROT1YMR200W ERP1Q05359 219 aaKnown RBP3.94□□□□□ -1.78
ROT1YMR200W YLR046CQ12253 270 aa3.94□□□□□ -1.78
ROT1YMR200W NAG1Q8TGN9 163 aa3.94□□□□□ -1.78
ROT1YMR200W HIR3P47171 1648 aa3.94□□□□□ -1.78
ROT1YMR200W SKI3P17883 1432 aaKnown RBP3.94□□□□□ -1.78
ROT1YMR200W HSP30P25619 332 aa3.93□□□□□ -1.78
ROT1YMR200W SFK1P35735 353 aa3.93□□□□□ -1.78
ROT1YMR200W PHO89P38361 574 aa3.93□□□□□ -1.78
ROT1YMR200W EDC2P40023 145 aaPredicted RBP3.93□□□□□ -1.78
ROT1YMR200W HMF1P40037 129 aaKnown RBP3.93□□□□□ -1.78
ROT1YMR200W STB1P42845 420 aa3.93□□□□□ -1.78
ROT1YMR200W YJR015WP47090 510 aa3.93□□□□□ -1.78
ROT1YMR200W YGR015CP53208 328 aa3.93□□□□□ -1.78
ROT1YMR200W CRH1P53301 507 aa3.93□□□□□ -1.78
ROT1YMR200W UBC7Q02159 165 aa3.93□□□□□ -1.78
ROT1YMR200W ELP3Q02908 557 aaKnown RBP3.93□□□□□ -1.78
ROT1YMR200W YDR249CQ03787 373 aa3.93□□□□□ -1.78
ROT1YMR200W TIR4Q12218 487 aaPredicted RBP3.93□□□□□ -1.78
ROT1YMR200W PST2Q12335 198 aaKnown RBP3.93□□□□□ -1.78
ROT1YMR200W WIP1Q2V2P8 89 aa3.93□□□□□ -1.78
ROT1YMR200W IPP1P00817 287 aaKnown RBP3.92□□□□□ -1.78
ROT1YMR200W RPB5P20434 215 aa3.92□□□□□ -1.78
ROT1YMR200W OCH1P31755 480 aa3.92□□□□□ -1.78
ROT1YMR200W YBR285WP38354 144 aa3.92□□□□□ -1.78
ROT1YMR200W YGL260WP53056 76 aa3.92□□□□□ -1.78
ROT1YMR200W RMI1Q02685 241 aa3.92□□□□□ -1.78
ROT1YMR200W YML108WQ03759 105 aa3.92□□□□□ -1.78
ROT1YMR200W GPI17Q04080 534 aa3.92□□□□□ -1.78
ROT1YMR200W FMP42Q04991 504 aa3.92□□□□□ -1.78
ROT1YMR200W DGA1Q08650 418 aa3.92□□□□□ -1.78
ROT1YMR200W MBF1O14467 151 aaKnown RBP3.91□□□□□ -1.78
ROT1YMR200W RPL2AP0CX45 254 aaKnown RBP3.91□□□□□ -1.78
ROT1YMR200W RPL2BP0CX46 254 aaKnown RBP3.91□□□□□ -1.78
ROT1YMR200W CPR4P25334 318 aa3.91□□□□□ -1.78
ROT1YMR200W YKL102CP34249 101 aa3.91□□□□□ -1.78
ROT1YMR200W TVP38P36164 337 aa3.91□□□□□ -1.78
ROT1YMR200W SMP1P38128 452 aa3.91□□□□□ -1.78
ROT1YMR200W SHE1P38200 338 aa3.91□□□□□ -1.78
ROT1YMR200W ATG18P43601 500 aa3.91□□□□□ -1.78
ROT1YMR200W BIR1P47134 954 aa3.91□□□□□ -1.78
ROT1YMR200W BNS1P50084 137 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms