RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C YAL063C-AQ3E791 96 aa1.74□□□□□ -2.13
VTI1YMR197C RPL25P04456 142 aaKnown RBP1.73□□□□□ -2.13
VTI1YMR197C CMD1P06787 147 aaKnown RBP1.73□□□□□ -2.13
VTI1YMR197C SEC4P07560 215 aaKnown RBP1.73□□□□□ -2.13
VTI1YMR197C COS2P0CX12 379 aa1.73□□□□□ -2.13
VTI1YMR197C COS3P0CX13 379 aa1.73□□□□□ -2.13
VTI1YMR197C EPT1P22140 391 aa1.73□□□□□ -2.13
VTI1YMR197C CLG1P35190 452 aa1.73□□□□□ -2.13
VTI1YMR197C CSG2P35206 410 aa1.73□□□□□ -2.13
VTI1YMR197C YKR041WP36134 250 aa1.73□□□□□ -2.13
VTI1YMR197C YHL044WP38727 235 aa1.73□□□□□ -2.13
VTI1YMR197C LSM4P40070 187 aaKnown RBP1.73□□□□□ -2.13
VTI1YMR197C RRG9P40156 214 aa1.73□□□□□ -2.13
VTI1YMR197C ICE2P40499 491 aa1.73□□□□□ -2.13
VTI1YMR197C YIL054WP40524 105 aa1.73□□□□□ -2.13
VTI1YMR197C CAT5P41735 233 aa1.73□□□□□ -2.13
VTI1YMR197C PRM10P42946 383 aa1.73□□□□□ -2.13
VTI1YMR197C COS4P43542 379 aa1.73□□□□□ -2.13
VTI1YMR197C MIC19P43594 170 aa1.73□□□□□ -2.13
VTI1YMR197C COQ5P49017 307 aa1.73□□□□□ -2.13
VTI1YMR197C PRM8P53174 237 aa1.73□□□□□ -2.13
VTI1YMR197C NQM1P53228 333 aaPredicted RBP1.73□□□□□ -2.13
VTI1YMR197C ERV29P53337 310 aa1.73□□□□□ -2.13
VTI1YMR197C COS6P53344 381 aa1.73□□□□□ -2.13
VTI1YMR197C IGO1P53897 168 aa1.73□□□□□ -2.13
VTI1YMR197C LSM7P53905 115 aaKnown RBP1.73□□□□□ -2.13
VTI1YMR197C NNT1Q05874 261 aa1.73□□□□□ -2.13
VTI1YMR197C YPR011CQ12251 326 aa1.73□□□□□ -2.13
VTI1YMR197C YPS3Q12303 508 aa1.73□□□□□ -2.13
VTI1YMR197C RDI1Q12434 202 aa1.73□□□□□ -2.13
VTI1YMR197C PEX11Q12462 236 aa1.73□□□□□ -2.13
VTI1YMR197C YPL229WQ99395 206 aa1.73□□□□□ -2.13
VTI1YMR197C SWI1P09547 1314 aa1.72□□□□□ -2.13
VTI1YMR197C RPS24AP0CX31 135 aaKnown RBP1.72□□□□□ -2.13
VTI1YMR197C RPS24BP0CX32 135 aaKnown RBP1.72□□□□□ -2.13
VTI1YMR197C PET54P10834 293 aa1.72□□□□□ -2.13
VTI1YMR197C SNF4P12904 322 aa1.72□□□□□ -2.13
VTI1YMR197C GRX2P17695 143 aaKnown RBP1.72□□□□□ -2.13
VTI1YMR197C SEC22P22214 214 aa1.72□□□□□ -2.13
VTI1YMR197C SCO1P23833 295 aa1.72□□□□□ -2.13
VTI1YMR197C SEC14P24280 304 aaKnown RBP1.72□□□□□ -2.13
VTI1YMR197C ARO7P32178 256 aa1.72□□□□□ -2.13
VTI1YMR197C PTM1P32857 523 aa1.72□□□□□ -2.13
VTI1YMR197C ZRT3P34240 503 aa1.72□□□□□ -2.13
VTI1YMR197C SMP1P38128 452 aa1.72□□□□□ -2.13
VTI1YMR197C NVJ1P38881 321 aa1.72□□□□□ -2.13
VTI1YMR197C RMD6P39975 231 aa1.72□□□□□ -2.13
VTI1YMR197C HMF1P40037 129 aaKnown RBP1.72□□□□□ -2.13
VTI1YMR197C YER189WP40104 122 aa1.72□□□□□ -2.13
VTI1YMR197C FMP32P43557 207 aa1.72□□□□□ -2.13
VTI1YMR197C YJL028WP47062 111 aa1.72□□□□□ -2.13
VTI1YMR197C MOG1P47123 218 aa1.72□□□□□ -2.13
VTI1YMR197C FLC3P53121 802 aa1.72□□□□□ -2.13
VTI1YMR197C YGR042WP53227 271 aa1.72□□□□□ -2.13
VTI1YMR197C YNL184CP53876 108 aa1.72□□□□□ -2.13
VTI1YMR197C PET191Q02772 108 aa1.72□□□□□ -2.13
VTI1YMR197C YMD8Q03697 442 aa1.72□□□□□ -2.13
VTI1YMR197C PLP1Q04004 230 aa1.72□□□□□ -2.13
VTI1YMR197C YMR244WQ04018 355 aa1.72□□□□□ -2.13
VTI1YMR197C DYN3Q04949 312 aa1.72□□□□□ -2.13
VTI1YMR197C YLR179CQ06252 201 aaKnown RBP1.72□□□□□ -2.13
VTI1YMR197C YPR127WQ06494 345 aa1.72□□□□□ -2.13
VTI1YMR197C SUE1Q06524 206 aa1.72□□□□□ -2.13
VTI1YMR197C YLR031WQ07978 186 aa1.72□□□□□ -2.13
VTI1YMR197C YOL029CQ08187 201 aa1.72□□□□□ -2.13
VTI1YMR197C YOL160WQ08321 113 aa1.72□□□□□ -2.13
VTI1YMR197C SLD7Q08457 257 aa1.72□□□□□ -2.13
VTI1YMR197C IES4Q08561 116 aa1.72□□□□□ -2.13
VTI1YMR197C YEL009C-AA0A023PZF2 135 aa1.71□□□□□ -2.14
VTI1YMR197C SIR2P06700 562 aa1.71□□□□□ -2.14
VTI1YMR197C MAG1P22134 296 aaKnown RBP1.71□□□□□ -2.14
VTI1YMR197C BUB2P26448 306 aaPredicted RBP1.71□□□□□ -2.14
VTI1YMR197C MDH3P32419 343 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
VTI1YMR197C TCA17P32613 152 aa1.71□□□□□ -2.14
VTI1YMR197C GPI18P38211 433 aa1.71□□□□□ -2.14
VTI1YMR197C DOG2P38773 246 aa1.71□□□□□ -2.14
VTI1YMR197C DOG1P38774 246 aa1.71□□□□□ -2.14
VTI1YMR197C TRR2P38816 342 aa1.71□□□□□ -2.14
VTI1YMR197C ASP1P38986 381 aaPredicted RBP1.71□□□□□ -2.14
VTI1YMR197C AST2P39945 430 aaKnown RBP1.71□□□□□ -2.14
VTI1YMR197C RSM25P40496 264 aa1.71□□□□□ -2.14
VTI1YMR197C AGE2P40529 298 aa1.71□□□□□ -2.14
VTI1YMR197C SYS1P41544 203 aa1.71□□□□□ -2.14
VTI1YMR197C UBC12P52491 188 aa1.71□□□□□ -2.14
VTI1YMR197C YGL204CP53089 101 aa1.71□□□□□ -2.14
VTI1YMR197C DID2P69771 204 aa1.71□□□□□ -2.14
VTI1YMR197C YPL039WQ03080 316 aa1.71□□□□□ -2.14
VTI1YMR197C YDR476CQ03362 224 aa1.71□□□□□ -2.14
VTI1YMR197C AIM34Q03673 198 aa1.71□□□□□ -2.14
VTI1YMR197C HPT1Q04178 221 aaKnown RBP1.71□□□□□ -2.14
VTI1YMR197C HNT1Q04344 158 aaKnown RBP1.71□□□□□ -2.14
VTI1YMR197C EMI1Q04406 187 aa1.71□□□□□ -2.14
VTI1YMR197C PST1Q12355 444 aa1.71□□□□□ -2.14
VTI1YMR197C MHT1Q12525 324 aa1.71□□□□□ -2.14
VTI1YMR197C DFM1Q12743 341 aaKnown RBP1.71□□□□□ -2.14
VTI1YMR197C YHR214C-EQ8TGK0 99 aa1.71□□□□□ -2.14
VTI1YMR197C HTL1Q9URQ5 78 aa1.71□□□□□ -2.14
VTI1YMR197C YHR139C-AO13536 103 aa1.7□□□□□ -2.14
VTI1YMR197C CDC7P06243 507 aa1.7□□□□□ -2.14
VTI1YMR197C ATG22P25568 528 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms