RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	PAU3	P25610	124 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	AGP2	P38090	596 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	THI2	P38141	450 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	SPC25	P40014	221 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	YLR460C	P54007	376 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	BUD25	P85052	153 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	YDR344C	Q05510	147 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	DIC1	Q06143	298 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	ISU2	Q12056	156 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	TRM13	Q12383	476 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	ISD11	Q6Q560	94 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	ADH1	P00330	348 aa	Known RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	ATS1	P31386	333 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	ARO4	P32449	370 aa	Known RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	NNK1	P36003	928 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	RPL14A	P36105	138 aa	Known RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	RPL14B	P38754	138 aa	Known RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	SEC72	P39742	193 aa	Known RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	BIT61	P47041	543 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	UBX6	P47049	396 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	YJR015W	P47090	510 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	UBP8	P50102	471 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	MTO1	P53070	669 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	ARR3	Q06598	404 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	ACK1	Q07622	623 aa	Predicted RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	ENB1	Q08299	606 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	MRH1	Q12117	320 aa	Predicted RBP	6.56	□□□□□ -1.36
AFG2	YLR397C	ICT1	Q12385	394 aa		6.56	□□□□□ -1.36
AFG2	YLR397C	TDH2	P00358	332 aa	Known RBP	6.55	□□□□□ -1.36
AFG2	YLR397C	VAR1	P02381	398 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	ATP10	P18496	279 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	FLO5	P38894	1075 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	YJL132W	P47014	750 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	MTR3	P48240	250 aa	Predicted RBP	6.55	□□□□□ -1.36
AFG2	YLR397C	APJ1	P53940	528 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	UTP23	Q12339	254 aa	Known RBP	6.55	□□□□□ -1.36
AFG2	YLR397C	GEP5	Q12393	293 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	YCR023C	P25351	611 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	6.55	□□□□□ -1.36	not detected
AFG2	YLR397C	RML2	P32611	393 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	COT1	P32798	439 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	CBP4	P37267	147 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	PRM5	P40476	318 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	LST7	P53237	242 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	VHT1	P53241	593 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	TSA2	Q04120	196 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	YLR040C	Q07988	224 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	NRT1	Q08485	598 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	NDD1	Q08887	554 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	YLR118C	Q12354	227 aa		6.55	□□□□□ -1.36
AFG2	YLR397C	TFB5	Q3E7C1	72 aa	Predicted RBP	6.55	□□□□□ -1.36
AFG2	YLR397C	TKL1	P23254	680 aa	Known RBP	6.54	□□□□□ -1.36
AFG2	YLR397C	SCD5	P34758	872 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	SOR1	P35497	357 aa	Known RBP	6.54	□□□□□ -1.36
AFG2	YLR397C	YMC2	P38087	329 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	YEL028W	P39989	153 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	PIC2	P40035	300 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	AYR1	P40471	297 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	GTS1	P40956	396 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	PFD1	P46988	109 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	YNL140C	P53910	189 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	MET31	Q03081	177 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	SOR2	Q07786	357 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	PAM18	Q07914	168 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	BSC1	Q12140	328 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	YPR015C	Q12531	247 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	POR1	P04840	283 aa	Known RBP	6.54	□□□□□ -1.36
AFG2	YLR397C	YFL068W	P0CX99	160 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	YLL066W-A	P0CY00	160 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	YLL067W-A	P0CY01	160 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	ANB1	P19211	157 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	ADK2	P26364	225 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	YKL187C	P34231	750 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	PAU24	P38155	120 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	ERG28	P40030	148 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	COX18	P53239	316 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	NCE103	P53615	221 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	BIO5	P53744	561 aa	Known RBP	6.54	□□□□□ -1.36
AFG2	YLR397C	GAS5	Q08193	484 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	YLR146W-A	Q2V2P1	62 aa		6.54	□□□□□ -1.36
AFG2	YLR397C	HTA1	P04911	132 aa	Known RBP	6.53	□□□□□ -1.36
AFG2	YLR397C	HEM2	P05373	342 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	TIR2	P33890	251 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	HSP10	P38910	106 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	PSD1	P39006	500 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	YEA6	P39953	335 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	IRC22	P40006	225 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	PAU5	P43575	122 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	ATG27	P46989	271 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	YMR210W	Q03649	449 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	ARA2	Q04212	335 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	YLR456W	Q06199	204 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	TFS1	P14306	219 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	DRE2	P36152	348 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	YND1	P40009	630 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	AIR1	P40507	360 aa	Known RBP	6.53	□□□□□ -1.36
AFG2	YLR397C	IKS1	P47042	667 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	TIS11	P47977	285 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	YGL262W	P53054	175 aa		6.53	□□□□□ -1.36
AFG2	YLR397C	TMA23	Q03525	211 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 171.7 ms