RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	ELC1	Q03071	99 aa		4.37	□□□□□ -1.71
CPS1	YJL172W	CTK1	Q03957	528 aa	Known RBP	4.37	□□□□□ -1.71
CPS1	YJL172W	YMR130W	Q04223	302 aa		4.37	□□□□□ -1.71
CPS1	YJL172W	YLR446W	Q06204	433 aa		4.37	□□□□□ -1.71
CPS1	YJL172W	CNL1	Q06333	122 aa		4.37	□□□□□ -1.71
CPS1	YJL172W	YOR029W	Q12243	111 aa		4.37	□□□□□ -1.71
CPS1	YJL172W	SFG1	Q12507	346 aa		4.37	□□□□□ -1.71
CPS1	YJL172W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.37	□□□□□ -1.71
CPS1	YJL172W	CYC7	P00045	113 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	ATP10	P18496	279 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	MCK1	P21965	375 aa	Known RBP	4.36	□□□□□ -1.71
CPS1	YJL172W	MSK1	P32048	576 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	CAT2	P32796	670 aa	Known RBP	4.36	□□□□□ -1.71
CPS1	YJL172W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	RIP-Chip
CPS1	YJL172W	OMA1	P36163	345 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	EHT1	P38295	451 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	HPA3	P39979	161 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	YEL057C	P39983	233 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	ISC1	P40015	477 aa	Known RBP	4.36	□□□□□ -1.71
CPS1	YJL172W	SLZ1	P40167	298 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	ERJ5	P43613	295 aa	Predicted RBP	4.36	□□□□□ -1.71
CPS1	YJL172W	STE24	P47154	453 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	DAN1	P47178	298 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	ROG1	P53118	685 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	YGL101W	P53144	215 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	DAD3	P69850	94 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	APS2	Q00381	147 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	ROT1	Q03691	256 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	LRS4	Q04087	347 aa	Known RBP	4.36	□□□□□ -1.71
CPS1	YJL172W	YOL131W	Q08270	108 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	YKL033W-A	Q86ZR7	236 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	YBR126W-A	Q8TGU7	68 aa		4.36	□□□□□ -1.71
CPS1	YJL172W	RPS4A	P0CX35	261 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	RPS4B	P0CX36	261 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	SFC1	P33303	322 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	MSN2	P33748	704 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YHR033W	P38690	423 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	DOG2	P38773	246 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	PHO90	P39535	881 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	RRG9	P40156	214 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	APQ12	P40532	138 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	ATG18	P43601	500 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	CHA4	P43634	648 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	RPA43	P46669	326 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YJL118W	P47022	219 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	TAX4	P47030	604 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	ERV29	P53337	310 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	MPA43	P53583	542 aa	Predicted RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	RHO5	P53879	331 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	TMA23	Q03525	211 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	IPK1	Q06667	281 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YPL245W	Q12179	454 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	FRE8	Q12209	686 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YDL199C	Q12407	687 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YPR145C-A	Q2V2P0	78 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	HAP3	P13434	144 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	TRR1	P29509	319 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	CDC5	P32562	705 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	ATG8	P38182	117 aa	RIP-Chip data	4.35	□□□□□ -1.71	not detected
CPS1	YJL172W	GGC1	P38988	300 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YEA6	P39953	335 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	SPO73	P40031	143 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YNL194C	P40169	301 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YPS6	P40583	537 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YFR057W	P43625	151 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	RIB4	P50861	169 aa	Predicted RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	EXG2	P52911	562 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	SDT1	P53078	280 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	YGL114W	P53134	725 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	RMD9	P53140	646 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	PRM8	P53174	237 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	SUN4	P53616	420 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	MET31	Q03081	177 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	AIM34	Q03673	198 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	UPS3	Q04006	179 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	BNA5	Q05979	453 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	ALG6	Q12001	544 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	MHT1	Q12525	324 aa		4.35	□□□□□ -1.71
CPS1	YJL172W	HRP1	Q99383	534 aa	Known RBP	4.35	□□□□□ -1.71
CPS1	YJL172W	VAR1	P02381	398 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	CYC3	P06182	269 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	PEP4	P07267	405 aa	Known RBP	4.34	□□□□□ -1.71
CPS1	YJL172W	YFL068W	P0CX99	160 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	YLL066W-A	P0CY00	160 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	YLL067W-A	P0CY01	160 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	PCL1	P24867	279 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	YEF1	P32622	495 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	EMC3	P36039	253 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	MIC12	P38341	106 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	LYS1	P38998	373 aa	RIP-Chip data	4.34	□□□□□ -1.71	not detected
CPS1	YJL172W	YER188W	P40103	239 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	PRE6	P40303	254 aa	Known RBP	4.34	□□□□□ -1.71
CPS1	YJL172W	MEP2	P41948	499 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	CIS3	P47001	227 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	BIT61	P47041	543 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	TAD2	P47058	250 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	MGA1	P53050	456 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	ASI3	P53983	676 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	ATG21	Q02887	496 aa		4.34	□□□□□ -1.71
CPS1	YJL172W	IRC13	Q08630	104 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms