RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YGR054WP53235 642 aaKnown RBP8.4□□□□□ -1.06
UBA4YHR111W ERV29P53337 310 aa8.4□□□□□ -1.06
UBA4YHR111W SRL4Q03085 281 aa8.4□□□□□ -1.06
UBA4YHR111W FMP42Q04991 504 aa8.4□□□□□ -1.06
UBA4YHR111W SOR2Q07786 357 aa8.4□□□□□ -1.06
UBA4YHR111W DCP1Q12517 231 aaPredicted RBP8.4□□□□□ -1.06
UBA4YHR111W AGA2P32781 87 aa8.39□□□□□ -1.07
UBA4YHR111W ADH5P38113 351 aaKnown RBP8.39□□□□□ -1.07
UBA4YHR111W NTC20P38302 140 aaPredicted RBP8.39□□□□□ -1.07
UBA4YHR111W PAC2P39937 518 aa8.39□□□□□ -1.07
UBA4YHR111W BBP1Q12365 385 aa8.39□□□□□ -1.07
UBA4YHR111W YOR192C-CQ3E736 78 aa8.39□□□□□ -1.07
UBA4YHR111W CDC34P14682 295 aa8.38□□□□□ -1.07
UBA4YHR111W OCH1P31755 480 aa8.38□□□□□ -1.07
UBA4YHR111W CPR5P35176 225 aa8.38□□□□□ -1.07
UBA4YHR111W MBA1P38300 278 aa8.38□□□□□ -1.07
UBA4YHR111W OTU1P43558 301 aa8.38□□□□□ -1.07
UBA4YHR111W YFL015CP43578 164 aa8.38□□□□□ -1.07
UBA4YHR111W YGL262WP53054 175 aa8.38□□□□□ -1.07
UBA4YHR111W YPL108WQ02872 168 aaPredicted RBP8.38□□□□□ -1.07
UBA4YHR111W FIT1Q04433 528 aa8.38□□□□□ -1.07
UBA4YHR111W KEI1Q06346 221 aa8.38□□□□□ -1.07
UBA4YHR111W YOR283WQ12040 230 aaKnown RBP8.38□□□□□ -1.07
UBA4YHR111W IFM1P25038 676 aa8.37□□□□□ -1.07
UBA4YHR111W SRL1Q08673 210 aa8.37□□□□□ -1.07
UBA4YHR111W AAC1P04710 309 aa8.36□□□□□ -1.07
UBA4YHR111W DPB2P24482 689 aaPredicted RBP8.36□□□□□ -1.07
UBA4YHR111W MSS1P32559 526 aaPredicted RBP8.36□□□□□ -1.07
UBA4YHR111W BNA1P47096 177 aa8.36□□□□□ -1.07
UBA4YHR111W YGR045CP53229 120 aa8.36□□□□□ -1.07
UBA4YHR111W NOC4Q06512 552 aaPredicted RBP8.36□□□□□ -1.07
UBA4YHR111W RPL3P14126 387 aaKnown RBP8.35□□□□□ -1.07
UBA4YHR111W BUD23P25627 275 aaPredicted RBP8.35□□□□□ -1.07
UBA4YHR111W RIB7P33312 244 aa8.35□□□□□ -1.07
UBA4YHR111W CAT5P41735 233 aa8.35□□□□□ -1.07
UBA4YHR111W SOL1P50278 321 aa8.35□□□□□ -1.07
UBA4YHR111W TMA10Q06177 86 aa8.35□□□□□ -1.07
UBA4YHR111W YOL118CQ08259 102 aa8.35□□□□□ -1.07
UBA4YHR111W TAL1P15019 335 aaKnown RBP8.34□□□□□ -1.07
UBA4YHR111W DAL3P32459 195 aa8.34□□□□□ -1.07
UBA4YHR111W RPB7P34087 171 aa8.34□□□□□ -1.07
UBA4YHR111W CBT1P36038 271 aaPredicted RBP8.34□□□□□ -1.07
UBA4YHR111W YHK8P38776 514 aa8.34□□□□□ -1.07
UBA4YHR111W SER2P42941 309 aa8.34□□□□□ -1.07
UBA4YHR111W RGC1Q06108 1083 aaKnown RBP8.34□□□□□ -1.07
UBA4YHR111W YLR031WQ07978 186 aa8.34□□□□□ -1.07
UBA4YHR111W NGL1Q08213 363 aaKnown RBP8.34□□□□□ -1.07
UBA4YHR111W YPR071WQ12346 211 aa8.34□□□□□ -1.07
UBA4YHR111W URA3P03962 267 aa8.33□□□□□ -1.08
UBA4YHR111W RNP1P32385 249 aa8.33□□□□□ -1.08
UBA4YHR111W SEC66P33754 206 aa8.33□□□□□ -1.08
UBA4YHR111W YBR197CP38306 217 aa8.33□□□□□ -1.08
UBA4YHR111W IRC18P47056 224 aa8.33□□□□□ -1.08
UBA4YHR111W YJR011CP47086 261 aaPredicted RBP8.33□□□□□ -1.08
UBA4YHR111W DIE2P50076 525 aa8.33□□□□□ -1.08
UBA4YHR111W SLX9P53251 210 aaPredicted RBP8.33□□□□□ -1.08
UBA4YHR111W YMR166CQ03829 368 aa8.33□□□□□ -1.08
UBA4YHR111W RAX2Q12465 1220 aa8.33□□□□□ -1.08
UBA4YHR111W GAR1P28007 205 aaKnown RBP8.32□□□□□ -1.08
UBA4YHR111W SUA7P29055 345 aaPredicted RBP8.32□□□□□ -1.08
UBA4YHR111W UTP11P34247 250 aaPredicted RBP8.32□□□□□ -1.08
UBA4YHR111W YKL102CP34249 101 aa8.32□□□□□ -1.08
UBA4YHR111W HPA3P39979 161 aa8.32□□□□□ -1.08
UBA4YHR111W PRM5P40476 318 aa8.32□□□□□ -1.08
UBA4YHR111W YDR286CQ05530 114 aa8.32□□□□□ -1.08
UBA4YHR111W TFC7Q12415 435 aa8.32□□□□□ -1.08
UBA4YHR111W PET54P10834 293 aa8.31□□□□□ -1.08
UBA4YHR111W BGL2P15703 313 aaKnown RBP8.31□□□□□ -1.08
UBA4YHR111W FUS3P16892 353 aaKnown RBP8.31□□□□□ -1.08
UBA4YHR111W YHR122WP38829 231 aa8.31□□□□□ -1.08
UBA4YHR111W MIT1P40002 666 aa8.31□□□□□ -1.08
UBA4YHR111W FCY21P40039 528 aa8.31□□□□□ -1.08
UBA4YHR111W BMT5P40493 336 aa8.31□□□□□ -1.08
UBA4YHR111W CWC23P52868 283 aaPredicted RBP8.31□□□□□ -1.08
UBA4YHR111W RAI1P53063 387 aaKnown RBP8.31□□□□□ -1.08
UBA4YHR111W ALG9P53868 555 aaKnown RBP8.31□□□□□ -1.08
UBA4YHR111W YDR415CQ04033 374 aaPredicted RBP8.31□□□□□ -1.08
UBA4YHR111W ALG6Q12001 544 aaKnown RBP8.31□□□□□ -1.08
UBA4YHR111W DGK1Q12382 290 aa8.31□□□□□ -1.08
UBA4YHR111W YLR365WQ7LIF2 110 aa8.31□□□□□ -1.08
UBA4YHR111W PMU1P36069 295 aa8.3□□□□□ -1.08
UBA4YHR111W YJR056CP47115 236 aa8.3□□□□□ -1.08
UBA4YHR111W MIX17Q03667 156 aa8.3□□□□□ -1.08
UBA4YHR111W YML018CQ03730 393 aa8.3□□□□□ -1.08
UBA4YHR111W DPB4Q04603 196 aaKnown RBP8.3□□□□□ -1.08
UBA4YHR111W YPL199CQ08954 240 aa8.3□□□□□ -1.08
UBA4YHR111W SWT1Q12104 458 aa8.3□□□□□ -1.08
UBA4YHR111W RPN13O13563 156 aa8.29□□□□□ -1.08
UBA4YHR111W PUP1P25043 261 aa8.29□□□□□ -1.08
UBA4YHR111W REC104P33323 182 aa8.29□□□□□ -1.08
UBA4YHR111W YUH1P35127 236 aa8.29□□□□□ -1.08
UBA4YHR111W IPI1P38803 334 aaPredicted RBP8.29□□□□□ -1.08
UBA4YHR111W SSO2P39926 295 aa8.29□□□□□ -1.08
UBA4YHR111W TY1A-MR1Q04215 440 aa8.29□□□□□ -1.08
UBA4YHR111W SOG2Q08817 791 aa8.29□□□□□ -1.08
UBA4YHR111W ATO3Q12359 275 aa8.29□□□□□ -1.08
UBA4YHR111W CKA1P15790 372 aa8.29□□□□□ -1.08
UBA4YHR111W SEN2P16658 377 aa8.29□□□□□ -1.08
UBA4YHR111W PHO85P17157 305 aa8.29□□□□□ -1.08
UBA4YHR111W RPL5P26321 297 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms