RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W CDC13P32797 924 aaKnown RBP1.72□□□□□ -2.13
NIC96YFR002W SSO1P32867 290 aa1.72□□□□□ -2.13
NIC96YFR002W PRY2P36110 329 aa1.72□□□□□ -2.13
NIC96YFR002W CUE1P38428 203 aa1.72□□□□□ -2.13
NIC96YFR002W YHL049CP38722 271 aa1.72□□□□□ -2.13
NIC96YFR002W WSC4P38739 605 aa1.72□□□□□ -2.13
NIC96YFR002W AVT7P40501 490 aa1.72□□□□□ -2.13
NIC96YFR002W YIL001WP40560 513 aa1.72□□□□□ -2.13
NIC96YFR002W TOS8P53147 276 aa1.72□□□□□ -2.13
NIC96YFR002W YKR104WP0CE69 306 aa1.72□□□□□ -2.13
NIC96YFR002W ASP3-2P0CX77 362 aa1.72□□□□□ -2.13
NIC96YFR002W ASP3-3P0CX78 362 aa1.72□□□□□ -2.13
NIC96YFR002W ASP3-4P0CX79 362 aa1.72□□□□□ -2.13
NIC96YFR002W ASP3-1P0CZ17 362 aa1.72□□□□□ -2.13
NIC96YFR002W RPL4AP10664 362 aaKnown RBP1.72□□□□□ -2.13
NIC96YFR002W GDH2P33327 1092 aaKnown RBP1.72□□□□□ -2.13
NIC96YFR002W KDX1P36005 433 aa1.72□□□□□ -2.13
NIC96YFR002W SMP1P38128 452 aa1.72□□□□□ -2.13
NIC96YFR002W CPR7P47103 393 aa1.72□□□□□ -2.13
NIC96YFR002W RPL4BP49626 362 aaKnown RBP1.72□□□□□ -2.13
NIC96YFR002W FMP41P53889 259 aaKnown RBP1.72□□□□□ -2.13
NIC96YFR002W RMI1Q02685 241 aa1.72□□□□□ -2.13
NIC96YFR002W YPL113CQ02961 396 aa1.72□□□□□ -2.13
NIC96YFR002W INM2Q05533 292 aa1.72□□□□□ -2.13
NIC96YFR002W SEI1Q06058 285 aa1.72□□□□□ -2.13
NIC96YFR002W RRS1Q08746 203 aaKnown RBP1.72□□□□□ -2.13
NIC96YFR002W JLP1Q12358 412 aa1.72□□□□□ -2.13
NIC96YFR002W SNU23Q12368 194 aaPredicted RBP1.72□□□□□ -2.13
NIC96YFR002W SPT3P06844 337 aa1.71□□□□□ -2.14
NIC96YFR002W BCY1P07278 416 aaKnown RBP1.71□□□□□ -2.14
NIC96YFR002W RPS19AP07280 144 aaKnown RBP1.71□□□□□ -2.14
NIC96YFR002W RPS19BP07281 144 aaPredicted RBP1.71□□□□□ -2.14
NIC96YFR002W SRY1P36007 326 aa1.71□□□□□ -2.14
NIC96YFR002W SEN34P39707 275 aa1.71□□□□□ -2.14
NIC96YFR002W PRE6P40303 254 aaKnown RBP1.71□□□□□ -2.14
NIC96YFR002W BMT5P40493 336 aa1.71□□□□□ -2.14
NIC96YFR002W SNZ3P43545 298 aa1.71□□□□□ -2.14
NIC96YFR002W SNZ2P53824 298 aa1.71□□□□□ -2.14
NIC96YFR002W RHO3Q00245 231 aaKnown RBP1.71□□□□□ -2.14
NIC96YFR002W YDR115WQ04598 105 aa1.71□□□□□ -2.14
NIC96YFR002W GPM2Q12008 311 aa1.71□□□□□ -2.14
NIC96YFR002W YDR018CQ12185 396 aa1.71□□□□□ -2.14
NIC96YFR002W YAL063C-AQ3E791 96 aa1.71□□□□□ -2.14
NIC96YFR002W RPL28P02406 149 aaKnown RBP1.71□□□□□ -2.14
NIC96YFR002W BGL2P15703 313 aaKnown RBP1.71□□□□□ -2.14
NIC96YFR002W FZO1P38297 855 aa1.71□□□□□ -2.14
NIC96YFR002W SEC72P39742 193 aaKnown RBP1.71□□□□□ -2.14
NIC96YFR002W KRE29P40026 464 aa1.71□□□□□ -2.14
NIC96YFR002W STB1P42845 420 aa1.71□□□□□ -2.14
NIC96YFR002W COQ5P49017 307 aa1.71□□□□□ -2.14
NIC96YFR002W NSA1P53136 463 aaPredicted RBP1.71□□□□□ -2.14
NIC96YFR002W SYF2P53277 215 aaPredicted RBP1.71□□□□□ -2.14
NIC96YFR002W SPG4Q04438 115 aa1.71□□□□□ -2.14
NIC96YFR002W ATG17Q06410 417 aa1.71□□□□□ -2.14
NIC96YFR002W VIK1Q12045 647 aa1.71□□□□□ -2.14
NIC96YFR002W PPH21P23594 369 aa1.7□□□□□ -2.14
NIC96YFR002W RRG9P40156 214 aa1.7□□□□□ -2.14
NIC96YFR002W MCM22P47167 239 aa1.7□□□□□ -2.14
NIC96YFR002W NUP57P48837 541 aa1.7□□□□□ -2.14
NIC96YFR002W YGL034CP53186 121 aa1.7□□□□□ -2.14
NIC96YFR002W YMR244WQ04018 355 aa1.7□□□□□ -2.14
NIC96YFR002W PEX10Q05568 337 aa1.7□□□□□ -2.14
NIC96YFR002W TPO4Q12256 659 aa1.7□□□□□ -2.14
NIC96YFR002W COS2P0CX12 379 aa1.7□□□□□ -2.14
NIC96YFR002W COS3P0CX13 379 aa1.7□□□□□ -2.14
NIC96YFR002W DPB2P24482 689 aaPredicted RBP1.7□□□□□ -2.14
NIC96YFR002W AST1P35183 429 aa1.7□□□□□ -2.14
NIC96YFR002W MRPL3P36516 390 aa1.7□□□□□ -2.14
NIC96YFR002W RFT1P38206 574 aaPredicted RBP1.7□□□□□ -2.14
NIC96YFR002W POP8P38208 133 aa1.7□□□□□ -2.14
NIC96YFR002W YHR127WP38833 243 aaKnown RBP1.7□□□□□ -2.14
NIC96YFR002W FRT2P39734 528 aa1.7□□□□□ -2.14
NIC96YFR002W COS4P43542 379 aa1.7□□□□□ -2.14
NIC96YFR002W OST3P48439 350 aa1.7□□□□□ -2.14
NIC96YFR002W COG7P53195 279 aa1.7□□□□□ -2.14
NIC96YFR002W FMP48P53233 369 aa1.7□□□□□ -2.14
NIC96YFR002W YIP3P53633 176 aa1.7□□□□□ -2.14
NIC96YFR002W MRX11Q03079 207 aa1.7□□□□□ -2.14
NIC96YFR002W HEM25Q07534 307 aa1.7□□□□□ -2.14
NIC96YFR002W YMR316C-AI2HB70 103 aa1.69□□□□□ -2.14
NIC96YFR002W SNF6P18888 332 aa1.69□□□□□ -2.14
NIC96YFR002W CAM1P29547 415 aaKnown RBP1.69□□□□□ -2.14
NIC96YFR002W SGE1P33335 543 aa1.69□□□□□ -2.14
NIC96YFR002W YCR087C-AP37263 153 aa1.69□□□□□ -2.14
NIC96YFR002W RNH201P53942 307 aa1.69□□□□□ -2.14
NIC96YFR002W MRS2Q01926 470 aa1.69□□□□□ -2.14
NIC96YFR002W MET2P08465 486 aa1.69□□□□□ -2.14
NIC96YFR002W FBA1P14540 359 aaKnown RBP1.69□□□□□ -2.14
NIC96YFR002W IMP1P28627 190 aa1.69□□□□□ -2.14
NIC96YFR002W VPH2P32341 215 aa1.69□□□□□ -2.14
NIC96YFR002W SPS18P32572 300 aa1.69□□□□□ -2.14
NIC96YFR002W TIP20P33891 701 aa1.69□□□□□ -2.14
NIC96YFR002W SHE3P38272 425 aaKnown RBP1.69□□□□□ -2.14
NIC96YFR002W POG1P40473 351 aa1.69□□□□□ -2.14
NIC96YFR002W YFL064CP43540 174 aa1.69□□□□□ -2.14
NIC96YFR002W IRC18P47056 224 aa1.69□□□□□ -2.14
NIC96YFR002W BRR6P53062 197 aa1.69□□□□□ -2.14
NIC96YFR002W YGL159WP53110 370 aa1.69□□□□□ -2.14
NIC96YFR002W YNL046WP53956 172 aa1.69□□□□□ -2.14
NIC96YFR002W ACT1P60010 375 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms