RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	BMT5	P40493	336 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	REE1	P40893	198 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	ATG18	P43601	500 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	CIS3	P47001	227 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	SNX4	P47057	423 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	BNS1	P50084	137 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	YGL235W	P53071	178 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	DTD1	Q07648	150 aa	Known RBP	4.62	□□□□□ -1.67
YEF1	YEL041W	SFM1	Q12314	213 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	DCN1	Q12395	269 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	POL2	P21951	2222 aa	Known RBP	4.62	□□□□□ -1.67
YEF1	YEL041W	ZWF1	P11412	505 aa	Known RBP	4.62	□□□□□ -1.67
YEF1	YEL041W	URA6	P15700	204 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	PPH21	P23594	369 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	CPR5	P35176	225 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	UBC13	P52490	153 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	NRM1	P53718	249 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	EMI1	Q04406	187 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	SEC13	Q04491	297 aa	Known RBP	4.62	□□□□□ -1.67
YEF1	YEL041W	YLR053C	Q12026	108 aa		4.62	□□□□□ -1.67
YEF1	YEL041W	MDM35	O60200	86 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	CMD1	P06787	147 aa	Known RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	RPS28B	P0C0X0	67 aa	Known RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	CUP1-1	P0CX80	61 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	CUP1-2	P0CX81	61 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	GPA2	P10823	449 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	YCR102C	P25608	368 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	CPR3	P25719	182 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	INO2	P26798	304 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	EHD3	P28817	500 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	FMP46	P36141	133 aa	Known RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	YPC1	P38298	316 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	PEX22	P39718	180 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	PRM10	P42946	383 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	YFL012W	P43580	148 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	YJR056C	P47115	236 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	JHD2	P47156	728 aa	Predicted RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	TIS11	P47977	285 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	NSA1	P53136	463 aa	Predicted RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	NQM1	P53228	333 aa	Predicted RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	GTR2	P53290	341 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	OSH6	Q02201	448 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	SNO1	Q03144	224 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	ARC18	Q05933	178 aa	Known RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	MHR1	Q06630	226 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	FDH1	Q08911	376 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	MCT1	Q12283	360 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	YPR064W	Q12492	139 aa		4.61	□□□□□ -1.67
YEF1	YEL041W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.61	□□□□□ -1.67
YEF1	YEL041W	CDC8	P00572	216 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	TIP20	P33891	701 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	YEL073C	P39974	107 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	PHB1	P40961	287 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	YJR012C	P47087	207 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	YDR248C	Q03786	193 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	DXO1	Q06349	442 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	CTR3	Q06686	241 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	YPD1	Q07688	167 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	NSL1	Q12143	216 aa		4.6	□□□□□ -1.67
YEF1	YEL041W	BRR2	P32639	2163 aa	Known RBP	4.59	□□□□□ -1.67
YEF1	YEL041W	TFS1	P14306	219 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	NSP1	P14907	823 aa	Known RBP	4.59	□□□□□ -1.67
YEF1	YEL041W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YEF1	YEL041W	YCR099C	P25657	155 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	KRE9	P39005	276 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	YJL016W	P47072	561 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	YGL260W	P53056	76 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	USE1	P53146	245 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	YNL095C	P53932	642 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	FAR10	Q06001	478 aa		4.59	□□□□□ -1.67
YEF1	YEL041W	DPM1	P14020	267 aa	Known RBP	4.58	□□□□□ -1.68
YEF1	YEL041W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YEF1	YEL041W	CDC10	P25342	322 aa	Known RBP	4.58	□□□□□ -1.68
YEF1	YEL041W	YHI9	P38765	294 aa		4.58	□□□□□ -1.68
YEF1	YEL041W	MMS2	P53152	137 aa		4.58	□□□□□ -1.68
YEF1	YEL041W	VHT1	P53241	593 aa		4.58	□□□□□ -1.68
YEF1	YEL041W	RHO3	Q00245	231 aa	Known RBP	4.58	□□□□□ -1.68
YEF1	YEL041W	HEM25	Q07534	307 aa		4.58	□□□□□ -1.68
YEF1	YEL041W	YCT1	Q12235	531 aa		4.58	□□□□□ -1.68
YEF1	YEL041W	SNU23	Q12368	194 aa	Predicted RBP	4.58	□□□□□ -1.68
YEF1	YEL041W	TFC7	Q12415	435 aa		4.58	□□□□□ -1.68
YEF1	YEL041W	YIL046W-A	Q3E7Z4	54 aa		4.58	□□□□□ -1.68
YEF1	YEL041W	DSF1	P0CX08	502 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	YNR073C	P0CX09	502 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	CPT1	P17898	393 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	POF1	P25576	258 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	YKL187C	P34231	750 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	TRM7	P38238	310 aa	Known RBP	4.57	□□□□□ -1.68
YEF1	YEL041W	CHL4	P38907	458 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	OXA1	P39952	402 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	SMB1	P40018	196 aa	Known RBP	4.57	□□□□□ -1.68
YEF1	YEL041W	NUP57	P48837	541 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	ASI3	P53983	676 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	NUP49	Q02199	472 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	ABF2	Q02486	183 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	YLR446W	Q06204	433 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	YNG1	Q08465	219 aa		4.57	□□□□□ -1.68
YEF1	YEL041W	HOM6	P31116	359 aa	Known RBP	4.56	□□□□□ -1.68
YEF1	YEL041W	SPT4	P32914	102 aa	Predicted RBP	4.56	□□□□□ -1.68
YEF1	YEL041W	RCK1	P38622	512 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms