RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W YCR022CP25620 114 aa1.71□□□□□ -2.14
UBP1YDL122W PPA2P28239 310 aa1.71□□□□□ -2.14
UBP1YDL122W URA10P30402 227 aa1.71□□□□□ -2.14
UBP1YDL122W SDH3P33421 198 aa1.71□□□□□ -2.14
UBP1YDL122W PTC1P35182 281 aa1.71□□□□□ -2.14
UBP1YDL122W BMT2P38278 337 aa1.71□□□□□ -2.14
UBP1YDL122W YHR035WP38769 630 aa1.71□□□□□ -2.14
UBP1YDL122W YER184CP39961 794 aa1.71□□□□□ -2.14
UBP1YDL122W SLM1P40485 686 aa1.71□□□□□ -2.14
UBP1YDL122W YIR014WP40570 242 aa1.71□□□□□ -2.14
UBP1YDL122W HIT1P46973 164 aa1.71□□□□□ -2.14
UBP1YDL122W TIS11P47977 285 aa1.71□□□□□ -2.14
UBP1YDL122W APJ1P53940 528 aa1.71□□□□□ -2.14
UBP1YDL122W GRH1Q04410 372 aaKnown RBP1.71□□□□□ -2.14
UBP1YDL122W CDC123Q05791 360 aa1.71□□□□□ -2.14
UBP1YDL122W ASR1Q06834 288 aa1.71□□□□□ -2.14
UBP1YDL122W SDO1Q07953 250 aaKnown RBP1.71□□□□□ -2.14
UBP1YDL122W FIT3Q08907 204 aa1.71□□□□□ -2.14
UBP1YDL122W IZH2Q12442 317 aa1.71□□□□□ -2.14
UBP1YDL122W NMT1P14743 455 aa1.7□□□□□ -2.14
UBP1YDL122W RPL24BP24000 155 aaKnown RBP1.7□□□□□ -2.14
UBP1YDL122W TRS65P32893 560 aa1.7□□□□□ -2.14
UBP1YDL122W ARC19P33204 171 aaKnown RBP1.7□□□□□ -2.14
UBP1YDL122W YRB2P40517 327 aa1.7□□□□□ -2.14
UBP1YDL122W HCH1P53834 153 aa1.7□□□□□ -2.14
UBP1YDL122W SLT2Q00772 484 aa1.7□□□□□ -2.14
UBP1YDL122W ECM11Q04110 302 aa1.7□□□□□ -2.14
UBP1YDL122W YLR177WQ06251 628 aa1.7□□□□□ -2.14
UBP1YDL122W ARR2Q06597 130 aa1.7□□□□□ -2.14
UBP1YDL122W IRC19Q07843 230 aa1.7□□□□□ -2.14
UBP1YDL122W MSH5Q12175 901 aa1.7□□□□□ -2.14
UBP1YDL122W NUP2P32499 720 aa1.7□□□□□ -2.14
UBP1YDL122W NDC1P32500 655 aa1.7□□□□□ -2.14
UBP1YDL122W GDH2P33327 1092 aaKnown RBP1.7□□□□□ -2.14
UBP1YDL122W YKL063CP35725 167 aa1.7□□□□□ -2.14
UBP1YDL122W ECM31P38122 312 aa1.7□□□□□ -2.14
UBP1YDL122W COX14P39103 70 aa1.7□□□□□ -2.14
UBP1YDL122W JLP2P40206 208 aa1.7□□□□□ -2.14
UBP1YDL122W DFG10P40526 253 aa1.7□□□□□ -2.14
UBP1YDL122W YIA6P40556 373 aa1.7□□□□□ -2.14
UBP1YDL122W OST1P41543 476 aaKnown RBP1.7□□□□□ -2.14
UBP1YDL122W DIM1P41819 318 aaKnown RBP1.7□□□□□ -2.14
UBP1YDL122W GOT1Q03554 138 aa1.7□□□□□ -2.14
UBP1YDL122W OST6Q03723 332 aa1.7□□□□□ -2.14
UBP1YDL122W POM33Q12164 279 aa1.7□□□□□ -2.14
UBP1YDL122W YCR024C-BQ3E7Z8 88 aa1.7□□□□□ -2.14
UBP1YDL122W DDP1Q99321 188 aaKnown RBP1.7□□□□□ -2.14
UBP1YDL122W ZRC1P20107 442 aa1.69□□□□□ -2.14
UBP1YDL122W SPO23P33757 523 aa1.69□□□□□ -2.14
UBP1YDL122W YHB1P39676 399 aaKnown RBP1.69□□□□□ -2.14
UBP1YDL122W YNL320WP42840 284 aa1.69□□□□□ -2.14
UBP1YDL122W FIP1P45976 327 aa1.69□□□□□ -2.14
UBP1YDL122W TAD2P47058 250 aa1.69□□□□□ -2.14
UBP1YDL122W CPD1P53314 239 aa1.69□□□□□ -2.14
UBP1YDL122W GOR1P53839 350 aa1.69□□□□□ -2.14
UBP1YDL122W YMR010WQ03687 405 aa1.69□□□□□ -2.14
UBP1YDL122W YDR391CQ04170 232 aa1.69□□□□□ -2.14
UBP1YDL122W KRE28Q04431 385 aa1.69□□□□□ -2.14
UBP1YDL122W PCL9Q12477 304 aa1.69□□□□□ -2.14
UBP1YDL122W HTZ1Q12692 134 aaKnown RBP1.69□□□□□ -2.14
UBP1YDL122W RAS2P01120 322 aaKnown RBP1.69□□□□□ -2.14
UBP1YDL122W PIS1P06197 220 aaKnown RBP1.69□□□□□ -2.14
UBP1YDL122W RPL31AP0C2H8 113 aaKnown RBP1.69□□□□□ -2.14
UBP1YDL122W HEM15P16622 393 aa1.69□□□□□ -2.14
UBP1YDL122W PHO85P17157 305 aa1.69□□□□□ -2.14
UBP1YDL122W RPL16BP26785 198 aaKnown RBP1.69□□□□□ -2.14
UBP1YDL122W YET1P35723 206 aa1.69□□□□□ -2.14
UBP1YDL122W PMU1P36069 295 aa1.69□□□□□ -2.14
UBP1YDL122W YCR087C-AP37263 153 aa1.69□□□□□ -2.14
UBP1YDL122W MIX23P38162 196 aa1.69□□□□□ -2.14
UBP1YDL122W SNZ1Q03148 297 aa1.69□□□□□ -2.14
UBP1YDL122W RRS1Q08746 203 aaKnown RBP1.69□□□□□ -2.14
UBP1YDL122W EAF3Q12432 401 aa1.69□□□□□ -2.14
UBP1YDL122W YBL111CQ3E7Y5 667 aa1.69□□□□□ -2.14
UBP1YDL122W YHR212W-AP0CX91 67 aa1.68□□□□□ -2.14
UBP1YDL122W ATR1P13090 542 aa1.68□□□□□ -2.14
UBP1YDL122W HSP26P15992 214 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
UBP1YDL122W YPK2P18961 677 aa1.68□□□□□ -2.14
UBP1YDL122W RPL16AP26784 199 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W AGA1P32323 725 aa1.68□□□□□ -2.14
UBP1YDL122W SSO1P32867 290 aa1.68□□□□□ -2.14
UBP1YDL122W YKL075CP36083 450 aa1.68□□□□□ -2.14
UBP1YDL122W NAT2P37293 288 aa1.68□□□□□ -2.14
UBP1YDL122W YBR137WP38276 179 aa1.68□□□□□ -2.14
UBP1YDL122W WWM1P43582 211 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W MRM2P53123 320 aa1.68□□□□□ -2.14
UBP1YDL122W MST27P53176 234 aa1.68□□□□□ -2.14
UBP1YDL122W VBA1Q04301 562 aa1.68□□□□□ -2.14
UBP1YDL122W YMR027WQ04371 470 aa1.68□□□□□ -2.14
UBP1YDL122W YMR226CQ05016 267 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W UTP23Q12339 254 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W THP2O13539 261 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W SPT3P06844 337 aa1.68□□□□□ -2.14
UBP1YDL122W VMA6P32366 345 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W MRPL6P32904 214 aa1.68□□□□□ -2.14
UBP1YDL122W RPS1AP33442 255 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W ZRT3P34240 503 aa1.68□□□□□ -2.14
UBP1YDL122W AVT5P38176 459 aa1.68□□□□□ -2.14
UBP1YDL122W PRS2P38620 318 aaKnown RBP1.68□□□□□ -2.14
UBP1YDL122W YHR180WP38868 163 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms