RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 SMC3Q9UQE7 1217 aa16.01■□□□□ 0.15
SRRT-219ENST00000641476 ACACBO00763 2458 aa16■□□□□ 0.15
SRRT-219ENST00000641476 ANHXE9PGG2 379 aa16■□□□□ 0.15
SRRT-219ENST00000641476 SPTLC1O15269 473 aa16■□□□□ 0.15
SRRT-219ENST00000641476 LAMTOR5O43504 91 aa16■□□□□ 0.15
SRRT-219ENST00000641476 B3GAT3O94766 335 aa16■□□□□ 0.15
SRRT-219ENST00000641476 C8AP07357 584 aa16■□□□□ 0.15
SRRT-219ENST00000641476 MCF2P10911 925 aa16■□□□□ 0.15
SRRT-219ENST00000641476 HARSP12081 509 aaKnown RBP16■□□□□ 0.15
SRRT-219ENST00000641476 FGFR3P22607 806 aa16■□□□□ 0.15
SRRT-219ENST00000641476 MCM2P49736 904 aa16■□□□□ 0.15
SRRT-219ENST00000641476 YARSP54577 528 aaKnown RBP16■□□□□ 0.15
SRRT-219ENST00000641476 SLC12A3P55017 1021 aa16■□□□□ 0.15
SRRT-219ENST00000641476 CSTF1Q05048 431 aaKnown RBP16■□□□□ 0.15
SRRT-219ENST00000641476 SOX4Q06945 474 aaPredicted RBP16■□□□□ 0.15
SRRT-219ENST00000641476 SNW1Q13573 536 aaKnown RBP16■□□□□ 0.15
SRRT-219ENST00000641476 UPP1Q16831 310 aa16■□□□□ 0.15
SRRT-219ENST00000641476 XKR4Q5GH76 650 aa16■□□□□ 0.15
SRRT-219ENST00000641476 ARL6IP4Q66PJ3 421 aaKnown RBP16■□□□□ 0.15
SRRT-219ENST00000641476 SYT2Q8N9I0 419 aaPredicted RBP16■□□□□ 0.15
SRRT-219ENST00000641476 ATRIPQ8WXE1 791 aa16■□□□□ 0.15
SRRT-219ENST00000641476 SHDQ96IW2 340 aa16■□□□□ 0.15
SRRT-219ENST00000641476 CDK5RAP3Q96JB5 506 aa16■□□□□ 0.15
SRRT-219ENST00000641476 PLIN2Q99541 437 aa16■□□□□ 0.15
SRRT-219ENST00000641476 RPP25Q9BUL9 199 aaKnown RBP16■□□□□ 0.15
SRRT-219ENST00000641476 ANKFY1Q9P2R3 1169 aa16■□□□□ 0.15
SRRT-219ENST00000641476 MTRRQ9UBK8 725 aa16■□□□□ 0.15
SRRT-219ENST00000641476 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
SRRT-219ENST00000641476 DOCK6Q96HP0 2047 aa16■□□□□ 0.15
SRRT-219ENST00000641476 SMIM28A0A1B0GU29 152 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 DCDC2BA2VCK2 349 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 SFI1A8K8P3 1242 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 I3L4J1 428 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 PLS3P13797 630 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 TKTP29401 623 aaKnown RBP15.99■□□□□ 0.15
SRRT-219ENST00000641476 STARD6P59095 220 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 GPC5P78333 572 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 NOLC1Q14978 699 aaKnown RBP eCLIP15.99■□□□□ 0.15
SRRT-219ENST00000641476 UBXN2BQ14CS0 331 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 ST3GAL2Q16842 350 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 ZNF528Q3MIS6 628 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 CD300LGQ6UXG3 332 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 GPR161Q8N6U8 529 aaKnown RBP15.99■□□□□ 0.15
SRRT-219ENST00000641476 TMEM161BQ8NDZ6 487 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 SPIRE2Q8WWL2 714 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
SRRT-219ENST00000641476 DDX27Q96GQ7 796 aaKnown RBP15.99■□□□□ 0.15
SRRT-219ENST00000641476 ZMAT2Q96NC0 199 aaKnown RBP15.99■□□□□ 0.15
SRRT-219ENST00000641476 CNTN3Q9P232 1028 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 FBXO4Q9UKT5 387 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 USP18Q9UMW8 372 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 PCDHGA2Q9Y5H1 932 aa15.99■□□□□ 0.15
SRRT-219ENST00000641476 MYH15Q9Y2K3 1946 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 KANSL1LA0AUZ9 987 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 MEFVO15553 781 aaPredicted RBP15.98■□□□□ 0.15
SRRT-219ENST00000641476 HNRNPA1P09651 372 aaKnown RBP eCLIP15.98■□□□□ 0.15
SRRT-219ENST00000641476 PLA2G4BP0C869 781 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 MAPTP10636 758 aaKnown RBP15.98■□□□□ 0.15
SRRT-219ENST00000641476 HOXA9P31269 272 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 BRCC3P46736 316 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
SRRT-219ENST00000641476 LMNB2Q03252 620 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 STRN3Q13033 797 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 PPM1LQ5SGD2 360 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 PARM1Q6UWI2 310 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 ALKAL1Q6UXT8 129 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 SLC7A14Q8TBB6 771 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 FGF14Q92915 247 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 ZBTB45Q96K62 511 aaPredicted RBP15.98■□□□□ 0.15
SRRT-219ENST00000641476 ACAP3Q96P50 834 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 SLC38A7Q9NVC3 462 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 KCND2Q9NZV8 630 aa15.98■□□□□ 0.15
SRRT-219ENST00000641476 SMG5Q9UPR3 1016 aaKnown RBP15.98■□□□□ 0.15
SRRT-219ENST00000641476 MTF2Q9Y483 593 aaPredicted RBP15.98■□□□□ 0.15
SRRT-219ENST00000641476 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.98■□□□□ 0.15
SRRT-219ENST00000641476 SPTBN2O15020 2390 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 NPHP3-ACAD11A0A0J9YXS1 232 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 PRR5-ARHGAP8B1AHC4 643 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 PODXLO00592 558 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 CCL16O15467 120 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 TOM1L1O75674 476 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 KCNE1P15382 129 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 FSHRP23945 695 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 OR1D2P34982 312 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 NTHL1P78549 312 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 ARHGAP8P85298 464 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 RAB33AQ14088 237 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 MLF2Q15773 248 aaPredicted RBP15.97■□□□□ 0.15
SRRT-219ENST00000641476 RSPO2Q6UXX9 243 aaPredicted RBP15.97■□□□□ 0.15
SRRT-219ENST00000641476 GRASPQ7Z6J2 395 aaPredicted RBP15.97■□□□□ 0.15
SRRT-219ENST00000641476 LRRC15Q8TF66 581 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 AK8Q96MA6 479 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 NTPCRQ9BSD7 190 aaKnown RBP15.97■□□□□ 0.15
SRRT-219ENST00000641476 TCHPQ9BT92 498 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 CDY1Q9Y6F8 540 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 COL4A3Q01955 1670 aa15.97■□□□□ 0.15
SRRT-219ENST00000641476 NOTCH4Q99466 2003 aa15.96■□□□□ 0.15
SRRT-219ENST00000641476 SLC26A4O43511 780 aa15.96■□□□□ 0.15
SRRT-219ENST00000641476 TRAPPC3O43617 180 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms