RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 AVENQ9NQS1 362 aaPredicted RBP21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 NUB1Q9Y5A7 615 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 CCDC66A2RUB6 948 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 HSF2BPO75031 334 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 MYBL1P10243 752 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 HSPA6P17066 643 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 PROZP22891 400 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 CTNNA2P26232 953 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 CTNNA1P35221 906 aaKnown RBP21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 CCNA1P78396 465 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 CENPCQ03188 943 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 TFDP1Q14186 410 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 NAA35Q5VZE5 725 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 TSHZ1Q6ZSZ6 1077 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 TRAPPC12Q8WVT3 735 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 FZD8Q9H461 694 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 ERAP1Q9NZ08 941 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 CPSF3Q9UKF6 684 aaKnown RBP21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 PCDHB4Q9Y5E5 795 aa21.09■□□□□ 0.97
PCDHB11-202ENST00000624887 PLXNA1Q9UIW2 1896 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 TTI1O43156 1089 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 SPOPO43791 374 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 GUCY2FP51841 1108 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 ARHGAP1Q07960 439 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 SURF1Q15526 300 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 ZNF792Q3KQV3 632 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 TMEM270Q6UE05 265 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 TRIM72Q6ZMU5 477 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 IMPG2Q9BZV3 1241 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 FAM204AQ9H8W3 233 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 GBA2Q9HCG7 927 aaPredicted RBP21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 PCDHA3Q9Y5H8 950 aa21.08■□□□□ 0.97
PCDHB11-202ENST00000624887 ACKR2O00590 384 aa21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 ASAP2O43150 1006 aa21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 HLTFQ14527 1009 aaKnown RBP eCLIP21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 EFCAB12Q6NXP0 572 aa21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 CPA5Q8WXQ8 436 aa21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 PTPRHQ9HD43 1115 aa21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 SLC45A1Q9Y2W3 748 aa21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 UMODL1Q5DID0 1318 aa21.08■□□□□ 0.96
PCDHB11-202ENST00000624887 OPA1O60313 960 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 ASS1P00966 412 aaKnown RBP21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 GNA15P30679 374 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 NSFP46459 744 aaKnown RBP21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 LAMC2Q13753 1193 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 SEL1L2Q5TEA6 688 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 TAPT1Q6NXT6 567 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 AADACL2Q6P093 401 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 MPZL3Q6UWV2 235 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 IQCKQ8N0W5 287 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 ABRAQ8N0Z2 381 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 RBBP8NLQ8NC74 664 aaPredicted RBP21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 CYFIP2Q96F07 1278 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 NLRP4Q96MN2 994 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 CELF4Q9BZC1 486 aaKnown RBP21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 RNPEPQ9H4A4 650 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 ERVK-5Q9HDB9 667 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 UTP11Q9Y3A2 253 aaKnown RBP21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 PLXNB2O15031 1838 aa21.07■□□□□ 0.96
PCDHB11-202ENST00000624887 PDHXO00330 501 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 CST3P01034 146 aaPredicted RBP21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 CETPP11597 493 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 ADORA2AP29274 412 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 HSPA9P38646 679 aaKnown RBP21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 DUOXA2Q1HG44 320 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 ATF7IP2Q5U623 682 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 ADAT2Q7Z6V5 191 aaKnown RBP21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 DDX42Q86XP3 938 aaKnown RBP eCLIP21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 MS4A4AQ96JQ5 239 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 ZIM3Q96PE6 472 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 RUFY1Q96T51 708 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 MTMR12Q9C0I1 747 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 VTA1Q9NP79 307 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 ANAPC7Q9UJX3 599 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 C22orf31O95567 290 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 GJB1P08034 283 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 PYGMP11217 842 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 RRM1P23921 792 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 MAPK4P31152 587 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 CLCN3P51790 818 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 ZNF484Q5JVG2 852 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 SCARA3Q6AZY7 606 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 MON1BQ7L1V2 547 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 CPNE8Q86YQ8 564 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 UBR7Q8N806 425 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 C2orf69Q8N8R5 385 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 NFKBIZQ9BYH8 718 aa21.06■□□□□ 0.96
PCDHB11-202ENST00000624887 MROH7Q68CQ1 1323 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 GOLGA8KD6RF30 607 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 INO80B-WBP1J3KQ70 363 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 DAPK3O43293 454 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 ZNF132P52740 706 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 NOMO3P69849 1222 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 DR1Q01658 176 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 DHX34Q14147 1143 aaKnown RBP21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 CFAP58Q5T655 872 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 GOLGA6L1Q8N7Z2 621 aa21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 INO80BQ9C086 356 aaPredicted RBP21.05■□□□□ 0.96
PCDHB11-202ENST00000624887 RAB17Q9H0T7 212 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms