RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 FOPNLQ96NB1 174 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TRIM9Q9C026 710 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 CDY2AQ9Y6F7 541 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CDY1Q9Y6F8 540 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CPS1P31327 1500 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 GTPBP10A4D1E9 387 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 RSPH10B2B2RC85 870 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 H0Y3Z8 333 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 DNAJC6O75061 913 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CD4P01730 458 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RSPH10BP0C881 870 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RAP1GDS1P52306 607 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CUL3Q13618 768 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 NR1I3Q14994 352 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 NAB2Q15742 525 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 SGSM1Q2NKQ1 1148 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CAPRIN2Q6IMN6 1127 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 C18orf8Q96DM3 657 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 SLC13A1Q9BZW2 595 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RANBP17Q9H2T7 1088 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 BATF3Q9NR55 127 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 IGSF9BQ9UPX0 1349 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 C3orf70A6NLC5 250 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 GTF2H3Q13889 308 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ANKRD40Q6AI12 368 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TAS2R42Q7RTR8 314 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TEX2Q8IWB9 1127 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PCYOX1LQ8NBM8 494 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 HIPK4Q8NE63 616 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 KCNK16Q96T55 309 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 XPO7Q9UIA9 1087 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 KIF28PB7ZC32 967 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 DPYSL4O14531 572 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 MAGEB2O15479 319 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 DEAF1O75398 565 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 ZNF211Q13398 564 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 PDK1Q15118 436 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CYFIP1Q7L576 1253 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 HAUS6Q7Z4H7 955 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 LINC00523Q86TU6 105 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 HOMEZQ8IX15 550 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ASIC4Q96FT7 647 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PSD3Q9NYI0 1048 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PAK5Q9P286 719 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ABT1Q9ULW3 272 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 PCDHGB4Q9UN71 923 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PRKCBP05771 671 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CCND1P24385 295 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TRIM28Q13263 835 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 SH3GL3Q99963 347 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 MKNK1Q9BUB5 465 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ZC3H7BQ9UGR2 993 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 DEPDC5O75140 1603 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PTPRMP28827 1452 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 A8MXQ7 604 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PRPF4O43172 522 aaKnown RBP eCLIP4.8□□□□□ -1.648e-7■□□□□ 10.5
CHD9-221ENST00000615216 CYP19A1P11511 503 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 ALDH18A1P54886 795 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 GPSM2P81274 684 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ZNF200P98182 395 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 CCDC144BQ3MJ40 725 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TRIM60Q495X7 471 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TMEM259Q4ZIN3 620 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 SPATA2LQ8IUW3 424 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 C1orf54Q8WWF1 131 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 DACH2Q96NX9 599 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RPAP3Q9H6T3 665 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 CATSPERBQ9H7T0 1116 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 NDFIP2Q9NV92 336 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 C5orf58C9J3I9 102 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 LCP1P13796 627 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RABL6Q3YEC7 729 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 EPHA10Q5JZY3 1008 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RDM1Q8NG50 284 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PDCD6IPQ8WUM4 868 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 TEKT4Q8WW24 435 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RSAD1Q9HA92 442 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TMEM8AQ9HCN3 771 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ABCF3Q9NUQ8 709 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ARHGEF38Q9NXL2 777 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PCSK1NQ9UHG2 260 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ZNF197O14709 1029 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 MEFVO15553 781 aaPredicted RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 KCNA2P16389 499 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 MUTP22033 750 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ADSSL1Q8N142 457 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 DYRK4Q9NR20 520 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 GID8Q9NWU2 228 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 NEMP1O14524 444 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 EXTL3O43909 919 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 TLR2O60603 784 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 CHN1P15882 459 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 FXR2P51116 673 aaKnown RBP eCLIP4.8□□□□□ -1.641e-6■■■■□ 20.1
CHD9-221ENST00000615216 MAP3K7CLP57077 242 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 WASHC5Q12768 1159 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 SV2CQ496J9 727 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 SYTL3Q4VX76 610 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 C12orf60Q5U649 245 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RBM46Q8TBY0 533 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms