RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RPL9P32969 192 aaKnown RBP19.45■□□□□ 0.7
SSBP1-215ENST00000612337 SMTNP53814 917 aa19.45■□□□□ 0.7
SSBP1-215ENST00000612337 STRN3Q13033 797 aa19.45■□□□□ 0.7
SSBP1-215ENST00000612337 PABPC1LQ4VXU2 614 aaKnown RBP19.45■□□□□ 0.7
SSBP1-215ENST00000612337 VARS2Q5ST30 1063 aaKnown RBP19.45■□□□□ 0.7
SSBP1-215ENST00000612337 SYT2Q8N9I0 419 aaPredicted RBP19.45■□□□□ 0.7
SSBP1-215ENST00000612337 TMEM161BQ8NDZ6 487 aa19.45■□□□□ 0.7
SSBP1-215ENST00000612337 PNMA5Q96PV4 448 aa19.45■□□□□ 0.7
SSBP1-215ENST00000612337 HCFC1R1Q9NWW0 138 aa19.45■□□□□ 0.7
SSBP1-215ENST00000612337 FRYLO94915 3013 aa19.45■□□□□ 0.7
SSBP1-215ENST00000612337 TOM1L1O75674 476 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 MAPTP10636 758 aaKnown RBP19.44■□□□□ 0.7
SSBP1-215ENST00000612337 GPC5P78333 572 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 ROR1Q01973 937 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 RAD51AP2Q09MP3 1159 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 NOLC1Q14978 699 aaKnown RBP eCLIP19.44■□□□□ 0.7
SSBP1-215ENST00000612337 NPAS3Q8IXF0 933 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 ZNF461Q8TAF7 563 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 TMX3Q96JJ7 454 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 ZBTB45Q96K62 511 aaPredicted RBP19.44■□□□□ 0.7
SSBP1-215ENST00000612337 KCND2Q9NZV8 630 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 SIT1Q9Y3P8 196 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 ZNF292O60281 2723 aa19.44■□□□□ 0.7
SSBP1-215ENST00000612337 ARHGEF37A1IGU5 675 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 VWA3AA6NCI4 1184 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 MEFVO15553 781 aaPredicted RBP19.43■□□□□ 0.7
SSBP1-215ENST00000612337 TBC1D4O60343 1298 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 ABLIM3O94929 683 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 HARSP12081 509 aaKnown RBP19.43■□□□□ 0.7
SSBP1-215ENST00000612337 SLC12A3P55017 1021 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 STARD6P59095 220 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 ARL6IP4Q66PJ3 421 aaKnown RBP19.43■□□□□ 0.7
SSBP1-215ENST00000612337 ZPBP2Q6X784 338 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 C18orf25Q96B23 403 aaPredicted RBP19.43■□□□□ 0.7
SSBP1-215ENST00000612337 SHDQ96IW2 340 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 CDK5RAP3Q96JB5 506 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 AVENQ9NQS1 362 aaPredicted RBP19.43■□□□□ 0.7
SSBP1-215ENST00000612337 DLGAP2Q9P1A6 1054 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 ANKFY1Q9P2R3 1169 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 NUB1Q9Y5A7 615 aa19.43■□□□□ 0.7
SSBP1-215ENST00000612337 PDCD11Q14690 1871 aaKnown RBP19.43■□□□□ 0.7
SSBP1-215ENST00000612337 WDR27A2RRH5 827 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 H3BQV1 296 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 H7C4K7 107 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 DCNP07585 359 aaKnown RBP19.42■□□□□ 0.7
SSBP1-215ENST00000612337 RHOP08100 348 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 PLA2G4BP0C869 781 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 GJB2P29033 226 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 MRPL58Q14197 206 aaKnown RBP19.42■□□□□ 0.7
SSBP1-215ENST00000612337 SLC10A6Q3KNW5 377 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 TMEM119Q4V9L6 283 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 SPECC1Q5M775 1068 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 PLIN2Q99541 437 aa19.42■□□□□ 0.7
SSBP1-215ENST00000612337 MRPS23Q9Y3D9 190 aaKnown RBP19.42■□□□□ 0.7
SSBP1-215ENST00000612337 CLDN3O15551 220 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 LRG1P02750 347 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 ATF2P15336 505 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 ELF1P32519 619 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 MCL1Q07820 350 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 TCEAL8Q8IYN2 117 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 PJA1Q8NG27 643 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 KCNN1Q92952 543 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 SUSD3Q96L08 255 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 GDE1Q9NZC3 331 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 DCHS1Q96JQ0 3298 aa19.41■□□□□ 0.7
SSBP1-215ENST00000612337 EP300Q09472 2414 aaPredicted RBP19.41■□□□□ 0.7
SSBP1-215ENST00000612337 H0YCG3 227 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 PRRG1O14668 218 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 SLC26A4O43511 780 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 PTPN2P17706 415 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 NCKAP1LP55160 1127 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 ARPP19P56211 112 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 PFKPQ01813 784 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 PRKCQQ04759 706 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 SNW1Q13573 536 aaKnown RBP19.4■□□□□ 0.7
SSBP1-215ENST00000612337 SLC5A9Q2M3M2 681 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 SEZ6Q53EL9 994 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 TPGS2Q68CL5 300 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 APPL2Q8NEU8 664 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 ING5Q8WYH8 240 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 AK8Q96MA6 479 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 KXD1Q9BQD3 176 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 DDX23Q9BUQ8 820 aaKnown RBP19.4■□□□□ 0.7
SSBP1-215ENST00000612337 FOXQ1Q9C009 403 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 LARSQ9P2J5 1176 aaKnown RBP19.4■□□□□ 0.7
SSBP1-215ENST00000612337 FBXL5Q9UKA1 691 aa19.4■□□□□ 0.7
SSBP1-215ENST00000612337 CACNA1IQ9P0X4 2223 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 KANSL1LA0AUZ9 987 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 ECI2O75521 394 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 CD2BP2O95400 341 aaKnown RBP19.39■□□□□ 0.69
SSBP1-215ENST00000612337 GLULP15104 373 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 MCM4P33991 863 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 MLF2Q15773 248 aaPredicted RBP19.39■□□□□ 0.69
SSBP1-215ENST00000612337 CTXN3Q4LDR2 81 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 SLC44A4Q53GD3 710 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 ARSHQ5FYA8 562 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 ZNF280DQ6N043 979 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 C1orf210Q8IVY1 113 aa19.39■□□□□ 0.69
SSBP1-215ENST00000612337 TBC1D32Q96NH3 1257 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms