RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 ENPEPQ07075 957 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 KCNJ12Q14500 433 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 DUOXA2Q1HG44 320 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 CDKAL1Q5VV42 579 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 TRIM59Q8IWR1 403 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 ZNF516Q92618 1163 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 RABGGTAQ92696 567 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 MMRN2Q9H8L6 949 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 DPP3Q9NY33 737 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 PDCD11Q14690 1871 aaKnown RBP23.39■■□□□ 1.33
NECAB3-221ENST00000607055 GBF1Q92538 1859 aa23.39■■□□□ 1.33
NECAB3-221ENST00000607055 LAG3P18627 525 aa23.38■■□□□ 1.33
NECAB3-221ENST00000607055 PBX3P40426 434 aa23.38■■□□□ 1.33
NECAB3-221ENST00000607055 SLC11A1P49279 550 aa23.38■■□□□ 1.33
NECAB3-221ENST00000607055 BCAR1P56945 870 aa23.38■■□□□ 1.33
NECAB3-221ENST00000607055 CLDN10P78369 228 aa23.38■■□□□ 1.33
NECAB3-221ENST00000607055 PAAF1Q9BRP4 392 aa23.38■■□□□ 1.33
NECAB3-221ENST00000607055 TMEM175Q9BSA9 504 aa23.38■■□□□ 1.33
NECAB3-221ENST00000607055 PRG3Q9Y2Y8 225 aaPredicted RBP23.38■■□□□ 1.33
NECAB3-221ENST00000607055 GCLMP48507 274 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 CLCNKBP51801 687 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 PPP3CAQ08209 521 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 LRIT3Q3SXY7 679 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 C1orf127Q8N9H9 656 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 COLGALT1Q8NBJ5 622 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 SLC35C1Q96A29 364 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 UROC1Q96N76 676 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 ZNF558Q96NG5 402 aa23.37■■□□□ 1.33
NECAB3-221ENST00000607055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.37■■□□□ 1.33
NECAB3-221ENST00000607055 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.37■■□□□ 1.33
NECAB3-221ENST00000607055 NT5C1B-RDH14C9J2C7 533 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 GOLGA6L19H0YKK7 550 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 PODXLO00592 558 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 NRP1O14786 923 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 STX10O60499 249 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 ALDH2P05091 517 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 ITGB3P05106 788 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 GALTP07902 379 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 LINC00271P0C7V0 271 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 DNAJB2P25686 324 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 EEF1GP26641 437 aaKnown RBP23.36■■□□□ 1.33
NECAB3-221ENST00000607055 LRPAP1P30533 357 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 ALDH7A1P49419 539 aaKnown RBP23.36■■□□□ 1.33
NECAB3-221ENST00000607055 AP3M2P53677 418 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 MCCD1P59942 119 aaPredicted RBP23.36■■□□□ 1.33
NECAB3-221ENST00000607055 BIRC3Q13489 604 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 TCP11X2Q5H9J9 407 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 KCNT2Q6UVM3 1135 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 TRAPPC11Q7Z392 1133 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 RNF214Q8ND24 703 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 CLP1Q92989 425 aaKnown RBP23.36■■□□□ 1.33
NECAB3-221ENST00000607055 DDX27Q96GQ7 796 aaKnown RBP23.36■■□□□ 1.33
NECAB3-221ENST00000607055 HSD3B7Q9H2F3 369 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 AAASQ9NRG9 546 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 FAN1Q9Y2M0 1017 aa23.36■■□□□ 1.33
NECAB3-221ENST00000607055 PHACTR2O75167 634 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 C4BPAP04003 597 aaKnown RBP23.35■■□□□ 1.33
NECAB3-221ENST00000607055 KRT19P08727 400 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 ZNF18P17022 549 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 CDK11BP21127 795 aaKnown RBP23.35■■□□□ 1.33
NECAB3-221ENST00000607055 RPL9P32969 192 aaKnown RBP23.35■■□□□ 1.33
NECAB3-221ENST00000607055 CTNNB1P35222 781 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 TPM4P67936 248 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 TAP1Q03518 808 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 TDRD10Q5VZ19 366 aaKnown RBP23.35■■□□□ 1.33
NECAB3-221ENST00000607055 C9orf57Q5W0N0 161 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 PPP2R2DQ66LE6 453 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 SV2AQ7L0J3 742 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 SPRED2Q7Z698 418 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 TIFAQ96CG3 184 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 C17orf80Q9BSJ5 609 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 ITGA11Q9UKX5 1188 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 MTUS1Q9ULD2 1270 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 PCDHB12Q9Y5F1 795 aa23.35■■□□□ 1.33
NECAB3-221ENST00000607055 F8W810 466 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 PPEF2O14830 753 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 POLR2BP30876 1174 aaKnown RBP23.34■■□□□ 1.33
NECAB3-221ENST00000607055 GTF2H1P32780 548 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 MXI1P50539 228 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 UPP1Q16831 310 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 SCARA3Q6AZY7 606 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 TGS1Q96RS0 853 aaKnown RBP23.34■■□□□ 1.33
NECAB3-221ENST00000607055 TUBGCP2Q9BSJ2 902 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 COLEC11Q9BWP8 271 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 SLC28A3Q9HAS3 691 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 TMEM8AQ9HCN3 771 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 TAB2Q9NYJ8 693 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 SIX4Q9UIU6 781 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 AGAP1Q9UPQ3 857 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 R3HCC1Q9Y3T6 440 aaKnown RBP23.34■■□□□ 1.33
NECAB3-221ENST00000607055 RWDD3Q9Y3V2 267 aa23.34■■□□□ 1.33
NECAB3-221ENST00000607055 ANO9A1A5B4 782 aa23.33■■□□□ 1.33
NECAB3-221ENST00000607055 B3GAT3O94766 335 aa23.33■■□□□ 1.33
NECAB3-221ENST00000607055 KIF4AO95239 1232 aa23.33■■□□□ 1.33
NECAB3-221ENST00000607055 AFPP02771 609 aaKnown RBP23.33■■□□□ 1.33
NECAB3-221ENST00000607055 ATP1A3P13637 1013 aa23.33■■□□□ 1.33
NECAB3-221ENST00000607055 PRKCSHP14314 528 aaPredicted RBP23.33■■□□□ 1.33
NECAB3-221ENST00000607055 BMPR1AP36894 532 aa23.33■■□□□ 1.33
NECAB3-221ENST00000607055 RBP5P82980 135 aa23.33■■□□□ 1.33
NECAB3-221ENST00000607055 KCNH2Q12809 1159 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms