RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NUCKS1Q9H1E3 243 aaKnown RBP20.03■□□□□ 0.8
SSBP4-212ENST00000601919 LRFN2Q9ULH4 789 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 PCDHB7Q9Y5E2 793 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 MICAL3Q7RTP6 2002 aa20.03■□□□□ 0.8
SSBP4-212ENST00000601919 ARL5CA6NH57 179 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 HOXA2O43364 376 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 NRDCO43847 1150 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 CLSTN1O94985 981 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 THP07101 528 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 KRT19P08727 400 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ACTN1P12814 892 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 UCHL3P15374 230 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ATF7P17544 494 aaPredicted RBP20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ATICP31939 592 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 CASP14P31944 242 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 MLH1P40692 756 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 RBP5P82980 135 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ZBED6P86452 979 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ZBTB6Q15916 424 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 GLB1LQ6UWU2 654 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ENOSF1Q7L5Y1 443 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 FMNL3Q8IVF7 1028 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 SEMA4DQ92854 862 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 LPPQ93052 612 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ZMAT2Q96NC0 199 aaKnown RBP20.02■□□□□ 0.8
SSBP4-212ENST00000601919 GAD1Q99259 594 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 TTYH3Q9C0H2 523 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 GANQ9H2C0 597 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 SIX2Q9NPC8 291 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 MYO6Q9UM54 1294 aa20.02■□□□□ 0.8
SSBP4-212ENST00000601919 ABHD14A-ACY1A0A1B0GW23 586 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 MFAP3LO75121 409 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 NOL4O94818 638 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 VNN1O95497 513 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 IBSPP21815 317 aaPredicted RBP20.01■□□□□ 0.79
SSBP4-212ENST00000601919 POLR2FP61218 127 aaKnown RBP20.01■□□□□ 0.79
SSBP4-212ENST00000601919 PPIGQ13427 754 aaKnown RBP eCLIP20.01■□□□□ 0.793e-7■■■■□ 23.8
SSBP4-212ENST00000601919 GLRA4Q5JXX5 417 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 COL13A1Q5TAT6 717 aaPredicted RBP20.01■□□□□ 0.79
SSBP4-212ENST00000601919 C1orf127Q8N9H9 656 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 URGCPQ8TCY9 931 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 KANSL3Q9P2N6 904 aa20.01■□□□□ 0.79
SSBP4-212ENST00000601919 TDRD15B5MCY1 1934 aaKnown RBP20.01■□□□□ 0.79
SSBP4-212ENST00000601919 TTC3P53804 2025 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 INPPL1O15357 1258 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 EVI5O60447 810 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 ASS1P00966 412 aaKnown RBP20■□□□□ 0.79
SSBP4-212ENST00000601919 ITGB3P05106 788 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 CSF2RAP15509 400 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 KRT9P35527 623 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 MFAP3P55082 362 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 MYO1EQ12965 1108 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 GRIK3Q13003 919 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 C7orf61Q8IZ16 206 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 ABI1Q8IZP0 508 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 OR8K1Q8NGG5 319 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 FAXDC2Q96IV6 333 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 ZFP42Q96MM3 310 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 PPP1R10Q96QC0 940 aaKnown RBP20■□□□□ 0.79
SSBP4-212ENST00000601919 SPAG5Q96R06 1193 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 IL23AQ9NPF7 189 aa20■□□□□ 0.79
SSBP4-212ENST00000601919 ZNHIT6Q9NWK9 470 aaKnown RBP20■□□□□ 0.79
SSBP4-212ENST00000601919 CCDC85CA6NKD9 419 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 MEIS3P2A8K0S8 358 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 PTGESO14684 152 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 OFD1O75665 1012 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 P4HA1P13674 534 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 TBXAS1P24557 533 aaPredicted RBP19.99■□□□□ 0.79
SSBP4-212ENST00000601919 ITGB8P26012 769 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 POLR2BP30876 1174 aaKnown RBP19.99■□□□□ 0.79
SSBP4-212ENST00000601919 FXR1P51114 621 aaKnown RBP eCLIP19.99■□□□□ 0.79
SSBP4-212ENST00000601919 NOP14P78316 857 aaKnown RBP19.99■□□□□ 0.79
SSBP4-212ENST00000601919 LRMPQ12912 555 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 ZNF699Q32M78 642 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 SMYD5Q6GMV2 418 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 DPY19L2P1Q6NXN4 242 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 NPAS4Q8IUM7 802 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 PPM1KQ8N3J5 372 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 TRIM44Q96DX7 344 aaPredicted RBP19.99■□□□□ 0.79
SSBP4-212ENST00000601919 FAM84AQ96KN4 292 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 ZNF560Q96MR9 790 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 PANX2Q96RD6 677 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 STK33Q9BYT3 514 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 UBE2TQ9NPD8 197 aaPredicted RBP19.99■□□□□ 0.79
SSBP4-212ENST00000601919 NLRC4Q9NPP4 1024 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 SIX4Q9UIU6 781 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 DNAJC12Q9UKB3 198 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 AGAP1Q9UPQ3 857 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 FHOD1Q9Y613 1164 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 LTBP2Q14767 1821 aa19.99■□□□□ 0.79
SSBP4-212ENST00000601919 EPHB6O15197 1021 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 BAIAP3O94812 1187 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 STAU1O95793 577 aaKnown RBP19.98■□□□□ 0.79
SSBP4-212ENST00000601919 CST3P01034 146 aaPredicted RBP19.98■□□□□ 0.79
SSBP4-212ENST00000601919 PNPLA4P41247 253 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 SCNN1GP51170 649 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 ADKP55263 362 aaKnown RBP19.98■□□□□ 0.79
SSBP4-212ENST00000601919 MYL6P60660 151 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 GCNT1Q02742 428 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 FPGSQ05932 587 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms