RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 CYP2J2P51589 502 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 FAM171A1Q5VUB5 890 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 BRSK2Q8IWQ3 736 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.78■■□□□ 1.08
SSBP4-210ENST00000601444 EFCAB13Q8IY85 973 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 RDH13Q8NBN7 331 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 SPATA20Q8TB22 786 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 PPP2R3CQ969Q6 453 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 DDX27Q96GQ7 796 aaKnown RBP21.78■■□□□ 1.08
SSBP4-210ENST00000601444 THEGQ9P2T0 379 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 IRAK3Q9Y616 596 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 SF3B1O75533 1304 aaKnown RBP eCLIP21.78■■□□□ 1.08
SSBP4-210ENST00000601444 PPEF2O14830 753 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 CLASP2O75122 1294 aaKnown RBP21.77■■□□□ 1.08
SSBP4-210ENST00000601444 URODP06132 367 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 CNPP09543 421 aaKnown RBP21.77■■□□□ 1.08
SSBP4-210ENST00000601444 CYP3A5P20815 502 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 KCNA5P22460 613 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 GLUD2P49448 558 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 POU5F1Q01860 360 aaKnown RBP21.77■■□□□ 1.08
SSBP4-210ENST00000601444 DSG1Q02413 1049 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 BMS1Q14692 1282 aaKnown RBP21.77■■□□□ 1.08
SSBP4-210ENST00000601444 TMEM132DQ14C87 1099 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 USP41Q3LFD5 358 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 RTP2Q5QGT7 225 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 SPATA1Q5VX52 437 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 ISM2Q6H9L7 571 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 LLGL2Q6P1M3 1020 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 HS2ST1Q7LGA3 356 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 CEP57Q86XR8 500 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 EFHBQ8N7U6 833 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 SMARCE1Q969G3 411 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 PDE11AQ9HCR9 933 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 MRPL17Q9NRX2 175 aaKnown RBP21.77■■□□□ 1.08
SSBP4-210ENST00000601444 STK39Q9UEW8 545 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 COG5Q9UP83 839 aa21.77■■□□□ 1.08
SSBP4-210ENST00000601444 H3BQ06 376 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-210ENST00000601444 TBX10O75333 385 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 IL18RAPO95256 599 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 LRPAP1P30533 357 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 SNRPFP62306 86 aaKnown RBP21.76■■□□□ 1.07
SSBP4-210ENST00000601444 KCNC3Q14003 757 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 PDCD11Q14690 1871 aaKnown RBP21.76■■□□□ 1.07
SSBP4-210ENST00000601444 SCARA3Q6AZY7 606 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 KIAA1841Q6NSI8 718 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 PRSS55Q6UWB4 352 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-210ENST00000601444 ELOA2Q8IYF1 753 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-210ENST00000601444 RIN2Q8WYP3 895 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-210ENST00000601444 FBXL18Q96ME1 805 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 KLHL5Q96PQ7 755 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 TSPAN18Q96SJ8 248 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 DERAQ9Y315 318 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 C2CD2Q9Y426 696 aa21.76■■□□□ 1.07
SSBP4-210ENST00000601444 ZNF233A6NK53 670 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 KIAA0391O15091 583 aaKnown RBP21.75■■□□□ 1.07
SSBP4-210ENST00000601444 SMC2O95347 1197 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 C12orf56Q8IXR9 622 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 XXYLT1Q8NBI6 393 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 BEST2Q8NFU1 509 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 GSDMAQ96QA5 445 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 CDCA3Q99618 268 aaPredicted RBP21.75■■□□□ 1.07
SSBP4-210ENST00000601444 LMBRD1Q9NUN5 540 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 CLEC1BQ9P126 229 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 CGNQ9P2M7 1197 aaKnown RBP21.75■■□□□ 1.07
SSBP4-210ENST00000601444 HOOK1Q9UJC3 728 aaKnown RBP21.75■■□□□ 1.07
SSBP4-210ENST00000601444 BARX2Q9UMQ3 279 aaPredicted RBP21.75■■□□□ 1.07
SSBP4-210ENST00000601444 ANK1P16157 1881 aa21.75■■□□□ 1.07
SSBP4-210ENST00000601444 PDXKO00764 312 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 XPOTO43592 962 aaKnown RBP21.74■■□□□ 1.07
SSBP4-210ENST00000601444 NCK2O43639 380 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 RPL17P18621 184 aaKnown RBP21.74■■□□□ 1.07
SSBP4-210ENST00000601444 TKTP29401 623 aaKnown RBP21.74■■□□□ 1.07
SSBP4-210ENST00000601444 KCNQ1P51787 676 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 TFAMQ00059 246 aaKnown RBP21.74■■□□□ 1.07
SSBP4-210ENST00000601444 CLUL1Q15846 466 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 SNRNP35Q16560 246 aaKnown RBP21.74■■□□□ 1.07
SSBP4-210ENST00000601444 CAMK4Q16566 473 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 C9orf57Q5W0N0 161 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 LMBRD2Q68DH5 695 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-210ENST00000601444 GUF1Q8N442 669 aaKnown RBP21.74■■□□□ 1.07
SSBP4-210ENST00000601444 TTPALQ9BTX7 342 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 DMAC2Q9NW81 257 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 RMND1Q9NWS8 449 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 DPP3Q9NY33 737 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 MAN1B1Q9UKM7 699 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 NUB1Q9Y5A7 615 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 HCFC2Q9Y5Z7 792 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 PTPRJQ12913 1337 aa21.74■■□□□ 1.07
SSBP4-210ENST00000601444 TEX28O15482 410 aa21.73■■□□□ 1.07
SSBP4-210ENST00000601444 FGFR3P22607 806 aa21.73■■□□□ 1.07
SSBP4-210ENST00000601444 KLRC2P26717 231 aa21.73■■□□□ 1.07
SSBP4-210ENST00000601444 PRCPP42785 496 aa21.73■■□□□ 1.07
SSBP4-210ENST00000601444 NDUFV1P49821 464 aa21.73■■□□□ 1.07
SSBP4-210ENST00000601444 ELAVL2Q12926 359 aaKnown RBP21.73■■□□□ 1.07
SSBP4-210ENST00000601444 ZNF658Q5TYW1 1059 aaPredicted RBP21.73■■□□□ 1.07
SSBP4-210ENST00000601444 GLYCTKQ8IVS8 523 aa21.73■■□□□ 1.07
SSBP4-210ENST00000601444 GOLGA5Q8TBA6 731 aa21.73■■□□□ 1.07
SSBP4-210ENST00000601444 LNX1Q8TBB1 728 aaPredicted RBP21.73■■□□□ 1.07
SSBP4-210ENST00000601444 ATXN2LQ8WWM7 1075 aaKnown RBP21.73■■□□□ 1.07
SSBP4-210ENST00000601444 EMILIN2Q9BXX0 1053 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms