RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TMEM130Q8N3G9 435 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 BEST2Q8NFU1 509 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 ZBED2Q9BTP6 218 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 VPS16Q9H269 839 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 PRO3102Q9H379 93 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 MMRN2Q9H8L6 949 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 TMEM8AQ9HCN3 771 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 DPP3Q9NY33 737 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 INSL6Q9Y581 213 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 RANBP2P49792 3224 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 B4GALT3O60512 393 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 FMO5P49326 533 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 MXI1P50539 228 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 GUCY2FP51841 1108 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 RNASELQ05823 741 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 DSC1Q08554 894 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 TUSC3Q13454 348 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 BTG3Q14201 252 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 TDRD10Q5VZ19 366 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 ZNF280BQ86YH2 543 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 TDHQ8IZJ6 230 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 C1orf127Q8N9H9 656 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 CXorf38Q8TB03 319 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 RAD9AQ99638 391 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 NDST4Q9H3R1 872 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 NRDE2Q9H7Z3 1164 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 GOLGA2P5Q9HBQ8 144 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 NLRC5Q86WI3 1866 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 SCN1AP35498 2009 aa17.18■□□□□ 0.34
CSNK1D-212ENST00000580061 GRXCR1A8MXD5 290 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 PMM2O15305 246 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 TLL1O43897 1013 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 ITGB3P05106 788 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 TPM2P07951 284 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 LRPAP1P30533 357 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 FANCCQ00597 558 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 KRT39Q6A163 491 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 FAM109BQ6ICB4 259 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 COLGALT2Q8IYK4 626 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 FAM193BQ96PV7 902 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 CWH43Q9H720 699 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 HCSTQ9UBK5 93 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 DNAJB4Q9UDY4 337 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 ITGA11Q9UKX5 1188 aa17.17■□□□□ 0.34
CSNK1D-212ENST00000580061 ANO9A1A5B4 782 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 P4HA2O15460 535 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 VNN1O95497 513 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 SERPINC1P01008 464 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 CST3P01034 146 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 CLCNKBP51801 687 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 RABGGTBP53611 331 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 BIRC3Q13489 604 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 UVSSAQ2YD98 709 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 C9orf57Q5W0N0 161 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 SCARA3Q6AZY7 606 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 UROC1Q96N76 676 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 TMEM175Q9BSA9 504 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 SIX4Q9UIU6 781 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 COQ4Q9Y3A0 265 aa17.16■□□□□ 0.34
CSNK1D-212ENST00000580061 A0A1B0GTH6 734 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 LGALS16A8MUM7 142 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 PES1O00541 588 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 PIRO00625 290 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 PHACTR2O75167 634 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 POLR2BP30876 1174 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 RPL9P32969 192 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 MYL7Q01449 175 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 UPP1Q16831 310 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 TAS1R2Q8TE23 839 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 DDX27Q96GQ7 796 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 NAP1L5Q96NT1 182 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 PAAF1Q9BRP4 392 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 AGAP1Q9UPQ3 857 aa17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 MRPL42Q9Y6G3 142 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-212ENST00000580061 GTPBP10A4D1E9 387 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 LCHNA4D1U4 455 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 PODXLO00592 558 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 PPEF2O14830 753 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 ZC3H11AO75152 810 aaKnown RBP eCLIP17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 HLA-DRAP01903 254 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 KRT19P08727 400 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 OR1G1P47890 313 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 BCAR1P56945 870 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 RBP5P82980 135 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 TRPC3Q13507 836 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 NCOA4Q13772 614 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 FILIP1LQ4L180 1135 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 EPC2Q52LR7 807 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 FIBCD1Q8N539 461 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms